Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060367.seq
(689 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 164 1e-41
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 163 2e-41
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 163 2e-41
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 93 5e-20
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 91 1e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 72 9e-14
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.007
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 36 0.007
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.007
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 35 0.013
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 0.022
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 33 0.029
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.21
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.21
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.48
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 29 0.48
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 29 0.84
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces pom... 28 1.5
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.4
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 5.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 164 bits (398), Expect = 1e-41
Identities = 90/174 (51%), Positives = 112/174 (64%)
Frame = +1
Query: 160 QTYHREVREGGPGNG*RILQICLGIGQTKG*AELGITIDIALWKFETSKYYVTIIDAPGH 339
+ + +E E G G+ + + + K E GITIDIALWKFET KY VT+IDAPGH
Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95
Query: 340 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGETKW 519
RDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV K
Sbjct: 96 RDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Query: 520 IPLNHHTVSPDLRKSRRKYPSYIQEDWATTQLLSLSCPFLDGHGDNMLEPSTKM 681
+ ++ ++I++ + + P GDNM+EP+T M
Sbjct: 156 DTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF-VPVSGFQGDNMIEPTTNM 206
Score = 137 bits (331), Expect = 2e-33
Identities = 62/66 (93%), Positives = 64/66 (96%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 236 DKLKAE 253
DKLKAE
Sbjct: 61 DKLKAE 66
Score = 46.4 bits (105), Expect = 4e-06
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 510 NKMDSTEPPYSEPRFEEIKKEVS-FIHSRRLGYNPAAVAFVPISGWARRQHVGAFNQNAW 686
NKMD+T +S+ RFEEI KE S FI +++G+NP V FVP+SG+ + W
Sbjct: 153 NKMDTTG--WSQARFEEIVKETSNFI--KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPW 208
Query: 687 F 689
+
Sbjct: 209 Y 209
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 163 bits (397), Expect = 2e-41
Identities = 89/174 (51%), Positives = 112/174 (64%)
Frame = +1
Query: 160 QTYHREVREGGPGNG*RILQICLGIGQTKG*AELGITIDIALWKFETSKYYVTIIDAPGH 339
+ + +E E G G+ + + + K E GITIDIALWKFET KY VT+IDAPGH
Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95
Query: 340 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGETKW 519
RDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV K
Sbjct: 96 RDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Query: 520 IPLNHHTVSPDLRKSRRKYPSYIQEDWATTQLLSLSCPFLDGHGDNMLEPSTKM 681
+ ++ ++I++ + + P GDNM+EP+T M
Sbjct: 156 DTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF-VPVSGFQGDNMIEPTTNM 206
Score = 137 bits (331), Expect = 2e-33
Identities = 62/66 (93%), Positives = 64/66 (96%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 236 DKLKAE 253
DKLKAE
Sbjct: 61 DKLKAE 66
Score = 46.4 bits (105), Expect = 4e-06
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 510 NKMDSTEPPYSEPRFEEIKKEVS-FIHSRRLGYNPAAVAFVPISGWARRQHVGAFNQNAW 686
NKMD+T +S+ RFEEI KE S FI +++G+NP V FVP+SG+ + W
Sbjct: 153 NKMDTTG--WSQARFEEIVKETSNFI--KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPW 208
Query: 687 F 689
+
Sbjct: 209 Y 209
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 163 bits (397), Expect = 2e-41
Identities = 89/174 (51%), Positives = 112/174 (64%)
Frame = +1
Query: 160 QTYHREVREGGPGNG*RILQICLGIGQTKG*AELGITIDIALWKFETSKYYVTIIDAPGH 339
+ + +E E G G+ + + + K E GITIDIALWKFET KY VT+IDAPGH
Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95
Query: 340 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGETKW 519
RDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA+TLGVKQLIV K
Sbjct: 96 RDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Query: 520 IPLNHHTVSPDLRKSRRKYPSYIQEDWATTQLLSLSCPFLDGHGDNMLEPSTKM 681
+ ++ ++I++ + + P GDNM+EP+T M
Sbjct: 156 DTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF-VPVSGFQGDNMIEPTTNM 206
Score = 137 bits (331), Expect = 2e-33
Identities = 62/66 (93%), Positives = 64/66 (96%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 236 DKLKAE 253
DKLKAE
Sbjct: 61 DKLKAE 66
Score = 46.4 bits (105), Expect = 4e-06
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 510 NKMDSTEPPYSEPRFEEIKKEVS-FIHSRRLGYNPAAVAFVPISGWARRQHVGAFNQNAW 686
NKMD+T +S+ RFEEI KE S FI +++G+NP V FVP+SG+ + W
Sbjct: 153 NKMDTTG--WSQARFEEIVKETSNFI--KKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPW 208
Query: 687 F 689
+
Sbjct: 209 Y 209
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 92.7 bits (220), Expect = 5e-20
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = +1
Query: 256 ELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 435
E G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG
Sbjct: 299 EKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGF 358
Query: 436 SKNGQTREHALLAFTLGVKQLIV 504
+ GQTREHA+LA T G+ L+V
Sbjct: 359 ERGGQTREHAVLARTQGINHLVV 381
Score = 76.6 bits (180), Expect = 3e-15
Identities = 33/62 (53%), Positives = 45/62 (72%)
Frame = +2
Query: 68 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 247
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 248 AE 253
E
Sbjct: 296 EE 297
Score = 32.3 bits (70), Expect = 0.068
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 510 NKMDSTEPPYSEPRFEEIKKEVSFIHSRRLGYNPAA-VAFVPISGW 644
NKMD +SE R++E ++S R GYN V ++P+S +
Sbjct: 384 NKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAY 429
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 91.1 bits (216), Expect = 1e-19
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +1
Query: 262 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 441
G+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +
Sbjct: 240 GVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLE 299
Query: 442 NGQTREHALLAFTLGVKQLIVGETK 516
NGQTREHA L LG+ +++V K
Sbjct: 300 NGQTREHAYLLRALGISEIVVSVNK 324
Score = 70.5 bits (165), Expect = 2e-13
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +2
Query: 68 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 247
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 248 AE 253
E
Sbjct: 235 EE 236
Score = 33.5 bits (73), Expect = 0.029
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 510 NKMDSTEPPYSEPRFEEIKKEVSFIHSRRLGYNPAAVAFVPIS 638
NK+D +SE RF+EIK VS + +G+ + V FVPIS
Sbjct: 323 NKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPIS 363
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 71.7 bits (168), Expect = 9e-14
Identities = 37/81 (45%), Positives = 52/81 (64%)
Frame = +1
Query: 262 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 441
GITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+
Sbjct: 101 GITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP----- 155
Query: 442 NGQTREHALLAFTLGVKQLIV 504
QTREH LLA +GVKQ++V
Sbjct: 156 --QTREHLLLARQVGVKQIVV 174
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 62 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 148
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 151
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 307 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 402
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 35.5 bits (78), Expect = 0.007
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +1
Query: 292 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 471
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R + +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVP 199
Query: 472 AFTLGVKQLIVGETKW 519
+ K +G W
Sbjct: 200 RISFVNKMDRMGADPW 215
Score = 29.1 bits (62), Expect = 0.63
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGI 157
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 151
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 307 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 402
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 34.7 bits (76), Expect = 0.013
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 262 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
GITI+ A F + +ID PGH DF + + D AV I+ G
Sbjct: 78 GITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
Score = 28.7 bits (61), Expect = 0.84
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCG 151
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.9 bits (74), Expect = 0.022
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 262 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
GIT I + F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 33.5 bits (73), Expect = 0.029
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 310 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 489
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 490 KQLIVGETK 516
K +I+ + K
Sbjct: 163 KHIIILQNK 171
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.21
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 283 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 307 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT-REHALLAFTL 483
Y + +ID+PGH DF + + + D A ++V A G I+ Q + + +
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQAWIDRIKVILVI 153
Query: 484 GVKQLIVGETKWIPLNHH 537
++ E K P+ H
Sbjct: 154 NKMDRLITELKLSPIEAH 171
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 319 IIDAPGHRDFIKNMITGTSQADCAVLIV 402
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 29.5 bits (63), Expect = 0.48
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +1
Query: 319 IIDAPGH---RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 489
++DA GH DF + + ADC + GT E+ A Q +HA+ +++G+
Sbjct: 222 LLDAEGHILLTDFGLSKVAENG-ADCRSFV---GTEEYCAPEILLEQPYDHAVDWWSMGI 277
Query: 490 K--QLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQED 597
L+ G + NH + + +++ P Y+ D
Sbjct: 278 LIFDLLTGSPPFTANNHKRIMEKITRAKPNIPFYVTSD 315
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 28.7 bits (61), Expect = 0.84
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -3
Query: 330 SINDGNIVLASFELPESNIDCDTELSSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 151
S++ + L S+ P S T L+ A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 253 AELGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 357
AE + I+I + E +++ T+ID PG DFI N
Sbjct: 67 AEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 910
Score = 27.9 bits (59), Expect = 1.5
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -3
Query: 393 HSAISLRGSCDHVLD--EISVSRSINDGNIVLASFELPESNID-CDTELSSAFSLSNTQA 223
H ++ S ++D +S+ +SIN + SF +++ CD ++ S FS NT +
Sbjct: 249 HYVFAISSSSLQIIDINTLSLVKSINLKDDESFSFISRLTSVHFCDRQIFSKFSAVNTAS 308
Query: 222 YLKDPLPISWASFSNFSMVRLS 157
K I ASFS S + L+
Sbjct: 309 TSKTSDTIERASFSKPSFIFLT 330
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 322 IDAPGHRDFIKNMITGTSQADCAVLIV 402
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -1
Query: 296 SNFQRAISIVIPSSAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWW 117
SN +R ++ V +PK I I++ F P S S C+Y S D W
Sbjct: 13 SNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWR 72
Query: 116 T 114
T
Sbjct: 73 T 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,911,475
Number of Sequences: 5004
Number of extensions: 61002
Number of successful extensions: 229
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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