Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060367.seq
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 94 7e-20
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 91 8e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 68 5e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 4e-11
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 40 0.002
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 40 0.002
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 35 0.044
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 35 0.044
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 35 0.044
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.058
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.058
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 34 0.10
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.18
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.18
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.24
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.24
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 32 0.31
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.2
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 29 3.8
At3g05310.1 68416.m00579 GTP-binding protein-related low similar... 29 3.8
At4g20715.1 68417.m03010 hypothetical protein 28 5.1
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 6.7
At2g13810.1 68415.m01524 aminotransferase class I and II family ... 27 8.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 83/150 (55%), Positives = 100/150 (66%)
Frame = +1
Query: 232 IGQTKG*AELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 411
+ + K E GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST 119
Query: 412 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQ 591
TG FEAGISK+GQTREHALLAFTLGVKQ+I K + ++ SY++
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 592 EDWATTQLLSLSCPFLDGHGDNMLEPSTKM 681
+ + P GDNM+E ST +
Sbjct: 180 KVGYNPDKIPF-VPISGFEGDNMIERSTNL 208
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAE 253
DKLKAE
Sbjct: 61 DKLKAE 66
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 83/150 (55%), Positives = 100/150 (66%)
Frame = +1
Query: 232 IGQTKG*AELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 411
+ + K E GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST 119
Query: 412 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQ 591
TG FEAGISK+GQTREHALLAFTLGVKQ+I K + ++ SY++
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 592 EDWATTQLLSLSCPFLDGHGDNMLEPSTKM 681
+ + P GDNM+E ST +
Sbjct: 180 KVGYNPDKIPF-VPISGFEGDNMIERSTNL 208
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAE 253
DKLKAE
Sbjct: 61 DKLKAE 66
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 83/150 (55%), Positives = 100/150 (66%)
Frame = +1
Query: 232 IGQTKG*AELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 411
+ + K E GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST 119
Query: 412 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQ 591
TG FEAGISK+GQTREHALLAFTLGVKQ+I K + ++ SY++
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 592 EDWATTQLLSLSCPFLDGHGDNMLEPSTKM 681
+ + P GDNM+E ST +
Sbjct: 180 KVGYNPDKIPF-VPISGFEGDNMIERSTNL 208
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAE 253
DKLKAE
Sbjct: 61 DKLKAE 66
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 83/150 (55%), Positives = 100/150 (66%)
Frame = +1
Query: 232 IGQTKG*AELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 411
+ + K E GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +
Sbjct: 60 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST 119
Query: 412 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQ 591
TG FEAGISK+GQTREHALLAFTLGVKQ+I K + ++ SY++
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
Query: 592 EDWATTQLLSLSCPFLDGHGDNMLEPSTKM 681
+ + P GDNM+E ST +
Sbjct: 180 KVGYNPDKIPF-VPISGFEGDNMIERSTNL 208
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAE 253
DKLKAE
Sbjct: 61 DKLKAE 66
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 94.3 bits (224), Expect = 7e-20
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +1
Query: 262 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 441
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G +
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 223
Query: 442 NGQTREHALLAFTLGVKQLIV 504
GQTREH LA TLGV +LIV
Sbjct: 224 GGQTREHVQLAKTLGVSKLIV 244
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/63 (42%), Positives = 45/63 (71%)
Frame = +2
Query: 65 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 244
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 245 KAE 253
+ E
Sbjct: 158 EEE 160
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 ELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 435
E GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 300 ERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGF 359
Query: 436 SK-NGQTREHALLAFTLGVKQLIVGETK 516
GQTREHA + GV+Q+IV K
Sbjct: 360 DNLKGQTREHARVLRGFGVEQVIVAINK 387
Score = 73.3 bits (172), Expect = 1e-13
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +2
Query: 71 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 250
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 251 E 253
E
Sbjct: 298 E 298
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 262 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 441
GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP----- 181
Query: 442 NGQTREHALLAFTLGVKQLIV 504
QT+EH LLA +GV ++V
Sbjct: 182 --QTKEHILLAKQVGVPDMVV 200
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 53 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 187
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +1
Query: 262 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 441
GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP----- 169
Query: 442 NGQTREHALLAFTLGVKQLI 501
QT+EH LLA +GV L+
Sbjct: 170 --QTKEHILLARQVGVPSLV 187
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 62 KEKTHINIVVIGHVDSGKSTTT 127
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
Frame = +1
Query: 256 ELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 435
E GITI A Y V IID PGH DF + D A+L++ + G I
Sbjct: 116 EKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSI 175
Query: 436 SKNGQTREHALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQEDW-ATTQ 612
+ + Q R + + K +G W LN + + P ++E++
Sbjct: 176 TVDRQMRRYEVPRVAFINKLDRMGADPWKVLNQARAKLRHHSAAVQVPIGLEENFQGLID 235
Query: 613 LLSLSCPFLDG-HGDNML 663
L+ + F G G+N++
Sbjct: 236 LIHVKAYFFHGSSGENVV 253
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGI 157
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
Frame = +1
Query: 256 ELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 435
E GITI A Y V IID PGH DF + D A+L++ + G I
Sbjct: 116 EKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSI 175
Query: 436 SKNGQTREHALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQEDW-ATTQ 612
+ + Q R + + K +G W LN + + P ++E++
Sbjct: 176 TVDRQMRRYEVPRVAFINKLDRMGADPWKVLNQARAKLRHHSAAVQVPIGLEENFQGLID 235
Query: 613 LLSLSCPFLDG-HGDNML 663
L+ + F G G+N++
Sbjct: 236 LIHVKAYFFHGSSGENVV 253
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGI 157
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +1
Query: 298 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 477
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 478 TLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKY 576
+ +K +I+ + K I L + + + ++ +K+
Sbjct: 178 MMRLKHIIILQNK-IDLINEKAATEQHEAIQKF 209
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/93 (24%), Positives = 45/93 (48%)
Frame = +1
Query: 298 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 477
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 478 TLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKY 576
+ +K +I+ + K I L + + + ++ +K+
Sbjct: 178 MMRLKHIIILQNK-IDLINEKAATEQHEAIQKF 209
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.1 bits (77), Expect = 0.044
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +1
Query: 292 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 459
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 460 HALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRRKY 576
H + +K +I+ + K I L V+ + ++ +K+
Sbjct: 166 HLAAVEIMQLKHIIILQNK-IDLIQENVAINQHEAIQKF 203
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 265 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 265 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 310 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 489
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 490 KQLIVGETK 516
K +I+ + K
Sbjct: 174 KDIIIIQNK 182
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 295 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 44 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 163
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 265 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGG 154
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 313 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 68 KTHINIVVIGHVDSGKSTTTGHLIYKCG 151
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 256 ELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
E GITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 144 ERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 256 ELGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
E GITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 131 ERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 178
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 319 IIDAPGHRDFIKNMITGTSQADCAVLIV 402
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 319 IIDAPGHRDFIKNMITGTSQADCAVLIV 402
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 319 IIDAPGHRDFIKNMITGTSQADCAVLIV 402
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 301 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 402
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCG 151
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 313 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 402
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/107 (22%), Positives = 46/107 (42%)
Frame = +1
Query: 301 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFT 480
++Y +D PG ++ ++ G + LIVAA T F + + + F
Sbjct: 2 ARYAAGAVDCPGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNVPPVLPDYKLPIEFFP 61
Query: 481 LGVKQLIVGETKWIPLNHHTVSPDLRKSRRKYPSYIQEDWATTQLLS 621
G+ IV +T P + V+ +L+++ +Y + T + LS
Sbjct: 62 DGIPVTIV-DTSSRPEDRDIVAEELKRADAVVLTYACDRPETLERLS 107
>At3g05310.1 68416.m00579 GTP-binding protein-related low similarity
to rac 1 protein [Physcomitrella patens] GI:7243743;
contains Pfam profile PF00036: EF hand (domain)
Length = 648
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +1
Query: 421 FEAGISKNGQTREHALLAFTLGVKQLIVGETKWIPLNHHTVSPDLRKSRR--KYPSYIQE 594
F G+++ G T + L T +++ + +T W L S DLR Y S+ ++
Sbjct: 248 FPQGVNERGLTLDGFLFLNTRLIEEARI-QTLWTMLRKFGYSNDLRLGDDLVPYSSFKRQ 306
Query: 595 DWATTQLLSLSCPFL-------DGHGDNMLEP 669
+ +L +++ FL D +GDN LEP
Sbjct: 307 ADQSVELTNVAIEFLREVYEFFDSNGDNNLEP 338
>At4g20715.1 68417.m03010 hypothetical protein
Length = 186
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Frame = -3
Query: 417 TGTGSYDEHSAISLRGSCDHVLDEISVSRSIN-DGNIVLASFELPESNID----CDTELS 253
TG S + S+ S R +LDE+S SRSI + N L + E ++D +TE++
Sbjct: 28 TGNPSNEAQSSRSNRIEIPTLLDELSGSRSIQAEVNARLLHQDHVEFDLDPVVSWNTEIT 87
Query: 252 SAFSLSNTQAYLK-DPL 205
+ +LS T++ + DPL
Sbjct: 88 AKKTLSTTESVAEFDPL 104
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 322 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 417
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At2g13810.1 68415.m01524 aminotransferase class I and II family
protein low similarity to Aromatic Aminotransferase from
Pyrococcus horikoshii GP|14278621; contains Pfam profile
PF00155 aminotransferase, classes I and II
Length = 456
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 552 FEEIKKEVSFIHSRRLGYNPAAVAFVPISGWARRQHV 662
F EI + I G+ P ++ ISG+ RR H+
Sbjct: 392 FNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDHI 428
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,529,431
Number of Sequences: 28952
Number of extensions: 331389
Number of successful extensions: 1057
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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