Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060366.seq
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 130 9e-31
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 121 4e-28
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 121 4e-28
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 4.1
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 7.2
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 7.2
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 7.2
U97001-4|AAM45354.1| 86|Caenorhabditis elegans Hypothetical pr... 27 9.5
U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 130 bits (314), Expect = 9e-31
Identities = 65/147 (44%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
+ +G++RKE+V I++SD++CP+EK+RM DVVSI P P++ YG R+H+L
Sbjct: 64 ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHXFASWL 600
PIDD++EGLTGNLF+V+LKPYF+EAYRP L ++ A A + ++ + +
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRP-LHKGDIFTVQA-AMRTVEFKVVETEPAPACI 181
Query: 601 LIP*YTVN--GXPIKREEEEEALNAVG 675
+ P ++ G PIKREEEEE++N +G
Sbjct: 182 VSPDTMIHYEGDPIKREEEEESMNDIG 208
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/63 (58%), Positives = 50/63 (79%)
Frame = +2
Query: 89 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNAARK 268
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKG ++
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 269 PFA 277
A
Sbjct: 73 SVA 75
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +3
Query: 510 RDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCE 623
+ D F V+ MR VEFKVVET+P+P CIV+PDT+IH E
Sbjct: 154 KGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYE 191
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 121 bits (292), Expect = 4e-28
Identities = 66/147 (44%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
+ +G++R+ETV IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHXFASWL 600
PIDD++EGLTGNLF+V+L+PYF +AYRP V A + ++ + +
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRP--VHKGDIFTVQAAMRTVEFKVVETDPAPACI 180
Query: 601 LIP*YTVN--GXPIKREEEEEALNAVG 675
+ P ++ G PIKREEEEEALN VG
Sbjct: 181 VAPDTVIHYEGDPIKREEEEEALNEVG 207
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/60 (60%), Positives = 50/60 (83%)
Frame = +2
Query: 89 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNAARK 268
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKG R+
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Score = 60.9 bits (141), Expect = 8e-10
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 510 RDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCE 623
+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH E
Sbjct: 153 KGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYE 190
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 121 bits (292), Expect = 4e-28
Identities = 66/147 (44%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
+ +G++R+ETV IVL+ DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHXFASWL 600
PIDD++EGLTGNLF+V+L+PYF +AYRP V A + ++ + +
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRP--VHKGDIFTVQAAMRTVEFKVVETDPAPACI 180
Query: 601 LIP*YTVN--GXPIKREEEEEALNAVG 675
+ P ++ G PIKREEEEEALN VG
Sbjct: 181 VAPDTVIHYEGDPIKREEEEEALNEVG 207
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/60 (60%), Positives = 50/60 (83%)
Frame = +2
Query: 89 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNAARK 268
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKG R+
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Score = 60.9 bits (141), Expect = 8e-10
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 510 RDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCE 623
+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH E
Sbjct: 153 KGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYE 190
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 103 IIRAFIICHFIQNLLLESKNYYNFY 29
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 68 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 217
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
protein ZK783.1 protein.
Length = 2585
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = -1
Query: 592 MQXGDGSVSTTLNSTA-RMPPRT-----MKVSSRGSDGKPP*STASSI 467
M+ G GS STT+N T PR+ +++++ G DG+P +T I
Sbjct: 726 MEEGSGSWSTTINGTGITGSPRSEGTIRVRITTLGEDGEPETATKPGI 773
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 68 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 217
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>U97001-4|AAM45354.1| 86|Caenorhabditis elegans Hypothetical
protein K08B12.2b protein.
Length = 86
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 230 GDTVLLKGNAARKPFASCS 286
G V+LKG+A+R PF +CS
Sbjct: 68 GQQVVLKGHASRCPFNNCS 86
>U97001-3|AAB52258.2| 449|Caenorhabditis elegans Hypothetical
protein K08B12.2a protein.
Length = 449
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 230 GDTVLLKGNAARKPFASCS 286
G V+LKG+A+R PF +CS
Sbjct: 68 GQQVVLKGHASRCPFNNCS 86
>U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical
protein F28E10.1d protein.
Length = 450
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTP 522
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 85 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 118
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTP 522
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 627 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 660
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTP 522
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 723 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 756
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTP 522
PI++ EGLT ++ ++ ++ E RP V TP
Sbjct: 769 PIEEEPEGLTSSIRDLSIRSLAKETERPAPVFTP 802
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,546
Number of Sequences: 27780
Number of extensions: 330154
Number of successful extensions: 800
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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