Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060364.seq
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.25 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.76 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.4  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 163 TCDEPPSHFEY*SDEIIIQ*YYFC 92
           TCDE   H  Y  D+   + YY C
Sbjct: 914 TCDEEEGHISYHPDKADCRMYYMC 937


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 205 QATPGPWWSSLCMASDPSVQRISLNT 282
           Q+TPG   S   + SDP+  ++ LNT
Sbjct: 131 QSTPGIKLSINIILSDPNTNKLKLNT 156


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 198 QHPEITSASLGPHVTNP 148
           Q P+  S S  PHV NP
Sbjct: 271 QRPKSASLSPPPHVYNP 287


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 147 QVISNISQTKLLYNNIIFALSLC*IVNYCV*QY 49
           ++  N+    L   N+++ L+LC  V Y   QY
Sbjct: 94  KIRKNLYYLLLFVINVLYVLTLCYAVYYWRQQY 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,607
Number of Sequences: 336
Number of extensions: 3714
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)