Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060364.seq
(683 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058794-1|AAL14023.1| 426|Drosophila melanogaster SD10657p pro... 205 4e-53
AF044734-1|AAC39012.1| 426|Drosophila melanogaster flotillin-1 ... 205 4e-53
AE013599-2081|AAF58120.1| 426|Drosophila melanogaster CG8200-PA... 205 4e-53
AE013599-2082|AAF58121.1| 430|Drosophila melanogaster CG8200-PB... 202 3e-52
BT009962-1|AAQ22431.1| 425|Drosophila melanogaster RE74011p pro... 116 4e-26
AE014298-2065|AAN09344.1| 425|Drosophila melanogaster CG32593-P... 116 4e-26
AE014298-2064|AAN09343.1| 425|Drosophila melanogaster CG32593-P... 116 4e-26
AE014298-2063|AAF48393.3| 438|Drosophila melanogaster CG32593-P... 108 6e-24
AE014298-2062|AAF48407.2| 438|Drosophila melanogaster CG32593-P... 108 6e-24
AF044916-1|AAC39013.1| 376|Drosophila melanogaster flotillin-2 ... 103 3e-22
AY069755-1|AAL39900.1| 401|Drosophila melanogaster LP11503p pro... 77 2e-14
AE014298-2080|AAN09346.1| 401|Drosophila melanogaster CG32593-P... 77 2e-14
AF160921-1|AAD46861.1| 536|Drosophila melanogaster BcDNA.LD0985... 32 0.64
AE014134-2853|AAF53618.1| 536|Drosophila melanogaster CG6582-PA... 32 0.64
AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA... 32 0.84
AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin su... 29 5.9
AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4 ... 29 5.9
AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p pro... 29 5.9
AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-P... 29 5.9
BT011035-1|AAR30195.1| 760|Drosophila melanogaster RE44586p pro... 29 7.8
AE013599-588|AAF59136.1| 760|Drosophila melanogaster CG11210-PA... 29 7.8
>AY058794-1|AAL14023.1| 426|Drosophila melanogaster SD10657p
protein.
Length = 426
Score = 205 bits (501), Expect = 4e-53
Identities = 102/126 (80%), Positives = 111/126 (88%)
Frame = +1
Query: 259 VQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
VQRISLNTMTLQVESP VYTSQGVPISVTGIAQVK+QGQN +MLL+ACEQFLGK+E EI
Sbjct: 41 VQRISLNTMTLQVESPCVYTSQGVPISVTGIAQVKVQGQNEDMLLTACEQFLGKSEAEIN 100
Query: 439 HIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMGITVVSYTLKDIRDE 618
HIALVTLEGHQRAIMGSMTVEEI K K K+ ++ASSDL NMGITVVSYT+KD+RDE
Sbjct: 101 HIALVTLEGHQRAIMGSMTVEEIYKDRKKFSKQVFEVASSDLANMGITVVSYTIKDLRDE 160
Query: 619 EGLLES 636
EG L S
Sbjct: 161 EGYLRS 166
Score = 86.2 bits (204), Expect = 4e-17
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 140 MTWGFVTCGPNEALVISGCCYSKPLLVPGGRAFVWP 247
MTWGFVTCGPNEALV+SGCCY KPLLVPGGRAFVWP
Sbjct: 1 MTWGFVTCGPNEALVVSGCCYMKPLLVPGGRAFVWP 36
Score = 39.5 bits (88), Expect = 0.004
Identities = 29/58 (50%), Positives = 32/58 (55%)
Frame = +3
Query: 510 KDRKIFSKKVFEVGVE*SNQHGNHSCVVYFEGHQRRGGAT*KL*GMARTAEVKRDARI 683
KDRK FSK+VFEV G + V Y R + GMARTAEVKRDARI
Sbjct: 125 KDRKKFSKQVFEVASSDLANMGI-TVVSYTIKDLRDEEGYLRSLGMARTAEVKRDARI 181
>AF044734-1|AAC39012.1| 426|Drosophila melanogaster flotillin-1
protein.
Length = 426
Score = 205 bits (501), Expect = 4e-53
Identities = 102/126 (80%), Positives = 111/126 (88%)
Frame = +1
Query: 259 VQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
VQRISLNTMTLQVESP VYTSQGVPISVTGIAQVK+QGQN +MLL+ACEQFLGK+E EI
Sbjct: 41 VQRISLNTMTLQVESPCVYTSQGVPISVTGIAQVKVQGQNEDMLLTACEQFLGKSEAEIN 100
Query: 439 HIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMGITVVSYTLKDIRDE 618
HIALVTLEGHQRAIMGSMTVEEI K K K+ ++ASSDL NMGITVVSYT+KD+RDE
Sbjct: 101 HIALVTLEGHQRAIMGSMTVEEIYKDRKKFSKQVFEVASSDLANMGITVVSYTIKDLRDE 160
Query: 619 EGLLES 636
EG L S
Sbjct: 161 EGYLRS 166
Score = 86.2 bits (204), Expect = 4e-17
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 140 MTWGFVTCGPNEALVISGCCYSKPLLVPGGRAFVWP 247
MTWGFVTCGPNEALV+SGCCY KPLLVPGGRAFVWP
Sbjct: 1 MTWGFVTCGPNEALVVSGCCYMKPLLVPGGRAFVWP 36
Score = 39.5 bits (88), Expect = 0.004
Identities = 29/58 (50%), Positives = 32/58 (55%)
Frame = +3
Query: 510 KDRKIFSKKVFEVGVE*SNQHGNHSCVVYFEGHQRRGGAT*KL*GMARTAEVKRDARI 683
KDRK FSK+VFEV G + V Y R + GMARTAEVKRDARI
Sbjct: 125 KDRKKFSKQVFEVASSDLANMGI-TVVSYTIKDLRDEEGYLRSLGMARTAEVKRDARI 181
>AE013599-2081|AAF58120.1| 426|Drosophila melanogaster CG8200-PA,
isoform A protein.
Length = 426
Score = 205 bits (501), Expect = 4e-53
Identities = 102/126 (80%), Positives = 111/126 (88%)
Frame = +1
Query: 259 VQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
VQRISLNTMTLQVESP VYTSQGVPISVTGIAQVK+QGQN +MLL+ACEQFLGK+E EI
Sbjct: 41 VQRISLNTMTLQVESPCVYTSQGVPISVTGIAQVKVQGQNEDMLLTACEQFLGKSEAEIN 100
Query: 439 HIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMGITVVSYTLKDIRDE 618
HIALVTLEGHQRAIMGSMTVEEI K K K+ ++ASSDL NMGITVVSYT+KD+RDE
Sbjct: 101 HIALVTLEGHQRAIMGSMTVEEIYKDRKKFSKQVFEVASSDLANMGITVVSYTIKDLRDE 160
Query: 619 EGLLES 636
EG L S
Sbjct: 161 EGYLRS 166
Score = 86.2 bits (204), Expect = 4e-17
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 140 MTWGFVTCGPNEALVISGCCYSKPLLVPGGRAFVWP 247
MTWGFVTCGPNEALV+SGCCY KPLLVPGGRAFVWP
Sbjct: 1 MTWGFVTCGPNEALVVSGCCYMKPLLVPGGRAFVWP 36
Score = 39.5 bits (88), Expect = 0.004
Identities = 29/58 (50%), Positives = 32/58 (55%)
Frame = +3
Query: 510 KDRKIFSKKVFEVGVE*SNQHGNHSCVVYFEGHQRRGGAT*KL*GMARTAEVKRDARI 683
KDRK FSK+VFEV G + V Y R + GMARTAEVKRDARI
Sbjct: 125 KDRKKFSKQVFEVASSDLANMGI-TVVSYTIKDLRDEEGYLRSLGMARTAEVKRDARI 181
>AE013599-2082|AAF58121.1| 430|Drosophila melanogaster CG8200-PB,
isoform B protein.
Length = 430
Score = 202 bits (494), Expect = 3e-52
Identities = 100/122 (81%), Positives = 109/122 (89%)
Frame = +1
Query: 259 VQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
VQRISLNTMTLQVESP VYTSQGVPISVTGIAQVK+QGQN +MLL+ACEQFLGK+E EI
Sbjct: 41 VQRISLNTMTLQVESPCVYTSQGVPISVTGIAQVKVQGQNEDMLLTACEQFLGKSEAEIN 100
Query: 439 HIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMGITVVSYTLKDIRDE 618
HIALVTLEGHQRAIMGSMTVEEI K K K+ ++ASSDL NMGITVVSYT+KD+RDE
Sbjct: 101 HIALVTLEGHQRAIMGSMTVEEIYKDRKKFSKQVFEVASSDLANMGITVVSYTIKDLRDE 160
Query: 619 EG 624
EG
Sbjct: 161 EG 162
Score = 86.2 bits (204), Expect = 4e-17
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 140 MTWGFVTCGPNEALVISGCCYSKPLLVPGGRAFVWP 247
MTWGFVTCGPNEALV+SGCCY KPLLVPGGRAFVWP
Sbjct: 1 MTWGFVTCGPNEALVVSGCCYMKPLLVPGGRAFVWP 36
Score = 35.9 bits (79), Expect = 0.052
Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 510 KDRKIFSKKVFEVGV-E*SNQHGNHSCVVYFEGHQRRGGAT*KL*--GMARTAEVKRDAR 680
KDRK FSK+VFEV + +N + G + L GMARTAEVKRDAR
Sbjct: 125 KDRKKFSKQVFEVASSDLANMGITVVSYTIKDLRDEEGDSKGYLRSLGMARTAEVKRDAR 184
Query: 681 I 683
I
Sbjct: 185 I 185
>BT009962-1|AAQ22431.1| 425|Drosophila melanogaster RE74011p
protein.
Length = 425
Score = 116 bits (278), Expect = 4e-26
Identities = 64/140 (45%), Positives = 91/140 (65%)
Frame = +1
Query: 217 GPWWSSLCMASDPSVQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLS 396
G W + + +D VQR+SLN MTL V TSQGVP++VTG+AQ KI + E+L +
Sbjct: 30 GGWAWAWWLVTD--VQRLSLNVMTLNPMCENVETSQGVPLTVTGVAQCKIM-KADELLGT 86
Query: 397 ACEQFLGKTEQEIQHIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMG 576
A EQFLGK+ +EI+ L TLEGH RAI+G++TVEE+ K ++A+ D+ MG
Sbjct: 87 ASEQFLGKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMG 146
Query: 577 ITVVSYTLKDIRDEEGLLES 636
I ++S+T+KD+ D+ L S
Sbjct: 147 IEILSFTIKDVYDDVQYLAS 166
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 158 TCGPNEALVIS-GCCYS-KPLLVPGGRAFVW 244
T GPNEAL++S GCC S K + GG A+ W
Sbjct: 6 TTGPNEALIVSGGCCGSTKKRTIVGGWAWAW 36
>AE014298-2065|AAN09344.1| 425|Drosophila melanogaster CG32593-PF,
isoform F protein.
Length = 425
Score = 116 bits (278), Expect = 4e-26
Identities = 64/140 (45%), Positives = 91/140 (65%)
Frame = +1
Query: 217 GPWWSSLCMASDPSVQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLS 396
G W + + +D VQR+SLN MTL V TSQGVP++VTG+AQ KI + E+L +
Sbjct: 30 GGWAWAWWLVTD--VQRLSLNVMTLNPMCENVETSQGVPLTVTGVAQCKIM-KADELLGT 86
Query: 397 ACEQFLGKTEQEIQHIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMG 576
A EQFLGK+ +EI+ L TLEGH RAI+G++TVEE+ K ++A+ D+ MG
Sbjct: 87 ASEQFLGKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMG 146
Query: 577 ITVVSYTLKDIRDEEGLLES 636
I ++S+T+KD+ D+ L S
Sbjct: 147 IEILSFTIKDVYDDVQYLAS 166
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 158 TCGPNEALVIS-GCCYS-KPLLVPGGRAFVW 244
T GPNEAL++S GCC S K + GG A+ W
Sbjct: 6 TTGPNEALIVSGGCCGSTKKRTIVGGWAWAW 36
>AE014298-2064|AAN09343.1| 425|Drosophila melanogaster CG32593-PB,
isoform B protein.
Length = 425
Score = 116 bits (278), Expect = 4e-26
Identities = 64/140 (45%), Positives = 91/140 (65%)
Frame = +1
Query: 217 GPWWSSLCMASDPSVQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLS 396
G W + + +D VQR+SLN MTL V TSQGVP++VTG+AQ KI + E+L +
Sbjct: 30 GGWAWAWWLVTD--VQRLSLNVMTLNPMCENVETSQGVPLTVTGVAQCKIM-KADELLGT 86
Query: 397 ACEQFLGKTEQEIQHIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMG 576
A EQFLGK+ +EI+ L TLEGH RAI+G++TVEE+ K ++A+ D+ MG
Sbjct: 87 ASEQFLGKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMG 146
Query: 577 ITVVSYTLKDIRDEEGLLES 636
I ++S+T+KD+ D+ L S
Sbjct: 147 IEILSFTIKDVYDDVQYLAS 166
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 158 TCGPNEALVIS-GCCYS-KPLLVPGGRAFVW 244
T GPNEAL++S GCC S K + GG A+ W
Sbjct: 6 TTGPNEALIVSGGCCGSTKKRTIVGGWAWAW 36
>AE014298-2063|AAF48393.3| 438|Drosophila melanogaster CG32593-PE,
isoform E protein.
Length = 438
Score = 108 bits (260), Expect = 6e-24
Identities = 65/152 (42%), Positives = 92/152 (60%), Gaps = 12/152 (7%)
Frame = +1
Query: 217 GPWWSSLCMASDPSVQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNS----- 381
G W + + +D VQR+SLN MTL V TSQGVP++VTG+AQ KI +S
Sbjct: 30 GGWAWAWWLVTD--VQRLSLNVMTLNPMCENVETSQGVPLTVTGVAQCKIMKSSSYKQTD 87
Query: 382 -------EMLLSACEQFLGKTEQEIQHIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRC 540
E+L +A EQFLGK+ +EI+ L TLEGH RAI+G++TVEE+ K
Sbjct: 88 YHNDEADELLGTASEQFLGKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALV 147
Query: 541 SKLASSDLINMGITVVSYTLKDIRDEEGLLES 636
++A+ D+ MGI ++S+T+KD+ D+ L S
Sbjct: 148 REVAAPDVGRMGIEILSFTIKDVYDDVQYLAS 179
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 158 TCGPNEALVIS-GCCYS-KPLLVPGGRAFVW 244
T GPNEAL++S GCC S K + GG A+ W
Sbjct: 6 TTGPNEALIVSGGCCGSTKKRTIVGGWAWAW 36
>AE014298-2062|AAF48407.2| 438|Drosophila melanogaster CG32593-PA,
isoform A protein.
Length = 438
Score = 108 bits (260), Expect = 6e-24
Identities = 65/152 (42%), Positives = 92/152 (60%), Gaps = 12/152 (7%)
Frame = +1
Query: 217 GPWWSSLCMASDPSVQRISLNTMTLQVESPTVYTSQGVPISVTGIAQVKIQGQNS----- 381
G W + + +D VQR+SLN MTL V TSQGVP++VTG+AQ KI +S
Sbjct: 30 GGWAWAWWLVTD--VQRLSLNVMTLNPMCENVETSQGVPLTVTGVAQCKIMKSSSYKQTD 87
Query: 382 -------EMLLSACEQFLGKTEQEIQHIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRC 540
E+L +A EQFLGK+ +EI+ L TLEGH RAI+G++TVEE+ K
Sbjct: 88 YHNDEADELLGTASEQFLGKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALV 147
Query: 541 SKLASSDLINMGITVVSYTLKDIRDEEGLLES 636
++A+ D+ MGI ++S+T+KD+ D+ L S
Sbjct: 148 REVAAPDVGRMGIEILSFTIKDVYDDVQYLAS 179
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 158 TCGPNEALVIS-GCCYS-KPLLVPGGRAFVW 244
T GPNEAL++S GCC S K + GG A+ W
Sbjct: 6 TTGPNEALIVSGGCCGSTKKRTIVGGWAWAW 36
>AF044916-1|AAC39013.1| 376|Drosophila melanogaster flotillin-2
protein.
Length = 376
Score = 103 bits (246), Expect = 3e-22
Identities = 55/118 (46%), Positives = 78/118 (66%)
Frame = +1
Query: 283 MTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQHIALVTLE 462
MTL V TSQGVP++VTG+AQ KI + E+L +A EQFLGK+ +EI+ L TLE
Sbjct: 1 MTLNPMCENVETSQGVPLTVTGVAQCKIM-KADELLGTASEQFLGKSVKEIKQTILQTLE 59
Query: 463 GHQRAIMGSMTVEEISKTEKYSRKRCSKLASSDLINMGITVVSYTLKDIRDEEGLLES 636
GH RAI+G++TVEE+ K ++A+ D+ MGI ++S+T+KD+ D+ L S
Sbjct: 60 GHLRAILGTLTVEEVYKDRDQFAALVREVAAPDVGRMGIEILSFTIKDVYDDVQYLAS 117
>AY069755-1|AAL39900.1| 401|Drosophila melanogaster LP11503p
protein.
Length = 401
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +1
Query: 373 QNSEMLLSACEQFLGKTEQEIQHIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLA 552
Q E+L +A EQFLGK+ +EI+ L TLEGH RAI+G++TVEE+ K ++A
Sbjct: 55 QADELLGTASEQFLGKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVA 114
Query: 553 SSDLINMGITVVSYTLKDIRDEEGLLES 636
+ D+ MGI ++S+T+KD+ D+ L S
Sbjct: 115 APDVGRMGIEILSFTIKDVYDDVQYLAS 142
>AE014298-2080|AAN09346.1| 401|Drosophila melanogaster CG32593-PC,
isoform C protein.
Length = 401
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +1
Query: 373 QNSEMLLSACEQFLGKTEQEIQHIALVTLEGHQRAIMGSMTVEEISKTEKYSRKRCSKLA 552
Q E+L +A EQFLGK+ +EI+ L TLEGH RAI+G++TVEE+ K ++A
Sbjct: 55 QADELLGTASEQFLGKSVKEIKQTILQTLEGHLRAILGTLTVEEVYKDRDQFAALVREVA 114
Query: 553 SSDLINMGITVVSYTLKDIRDEEGLLES 636
+ D+ MGI ++S+T+KD+ D+ L S
Sbjct: 115 APDVGRMGIEILSFTIKDVYDDVQYLAS 142
>AF160921-1|AAD46861.1| 536|Drosophila melanogaster BcDNA.LD09852
protein.
Length = 536
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 499 EEISKTEKYSRKRCSKLASSDLINMGITVVSYTLKDIRDEE 621
++IS ++ +R+RC K ++ L+ MG TV++ ++D EE
Sbjct: 140 QQISTGDETTRERCLKFIATKLLTMGPTVITKEIEDYIVEE 180
>AE014134-2853|AAF53618.1| 536|Drosophila melanogaster CG6582-PA
protein.
Length = 536
Score = 32.3 bits (70), Expect = 0.64
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 499 EEISKTEKYSRKRCSKLASSDLINMGITVVSYTLKDIRDEE 621
++IS ++ +R+RC K ++ L+ MG TV++ ++D EE
Sbjct: 140 QQISTGDETTRERCLKFIATKLLTMGPTVITKEIEDYIVEE 180
>AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA
protein.
Length = 2272
Score = 31.9 bits (69), Expect = 0.84
Identities = 25/79 (31%), Positives = 35/79 (44%)
Frame = +1
Query: 283 MTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQHIALVTLE 462
+TL V+ TS V + V I + N LLS E L ++ Q + + LE
Sbjct: 624 LTLSVQPSQSSTSLRVSVKVKDITAYFVNHHNVYSLLSFSELNLSRS----QSLTTLKLE 679
Query: 463 GHQRAIMGSMTVEEISKTE 519
Q AIM SMT + T+
Sbjct: 680 EFQMAIMRSMTASSLCLTD 698
>AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin
subunit SMC4 protein.
Length = 1409
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 283 MTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
M QV + T ++ IS + ++IQ + + ++ C++ G E+EIQ
Sbjct: 768 MGTQVRTKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQ 819
>AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4
homolog Gluon protein.
Length = 1409
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 283 MTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
M QV + T ++ IS + ++IQ + + ++ C++ G E+EIQ
Sbjct: 768 MGTQVRTKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQ 819
>AF160943-1|AAD46883.2| 1012|Drosophila melanogaster LD20207p
protein.
Length = 1012
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 283 MTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
M QV + T ++ IS + ++IQ + + ++ C++ G E+EIQ
Sbjct: 768 MGTQVRTKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQ 819
>AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-PA
protein.
Length = 1409
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 283 MTLQVESPTVYTSQGVPISVTGIAQVKIQGQNSEMLLSACEQFLGKTEQEIQ 438
M QV + T ++ IS + ++IQ + + ++ C++ G E+EIQ
Sbjct: 768 MGTQVRTKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQ 819
>BT011035-1|AAR30195.1| 760|Drosophila melanogaster RE44586p
protein.
Length = 760
Score = 28.7 bits (61), Expect = 7.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 537 PFSRIFFCL*YFLDRHRSHYS 475
PF+ I+ CL +F+DRH +++
Sbjct: 606 PFAMIYICLKHFVDRHNLYFA 626
>AE013599-588|AAF59136.1| 760|Drosophila melanogaster CG11210-PA
protein.
Length = 760
Score = 28.7 bits (61), Expect = 7.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 537 PFSRIFFCL*YFLDRHRSHYS 475
PF+ I+ CL +F+DRH +++
Sbjct: 606 PFAMIYICLKHFVDRHNLYFA 626
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,782,355
Number of Sequences: 53049
Number of extensions: 672898
Number of successful extensions: 1817
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -