Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060363.seq
(268 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120; Fung... 93 1e-18
UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5; ... 67 8e-11
UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=... 61 5e-09
UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2; Eukaryota|... 59 2e-08
UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-07
UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24; Vir... 53 1e-06
UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6; Dikarya... 51 4e-06
UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2; Crypto... 50 1e-05
UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n... 44 9e-04
UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1; O... 43 0.002
UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia A... 38 0.058
UniRef50_UPI0000E802DD Cluster: PREDICTED: hypothetical protein;... 36 0.18
UniRef50_A0LUL4 Cluster: Secreted protein precursor; n=1; Acidot... 34 0.71
UniRef50_Q4PCW3 Cluster: Putative uncharacterized protein; n=1; ... 34 0.71
UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1; Guilla... 33 1.6
UniRef50_UPI00006CA9E6 Cluster: hypothetical protein TTHERM_0032... 32 2.9
UniRef50_A1B1P4 Cluster: Cobalamin synthesis protein, P47K; n=1;... 31 5.0
UniRef50_P53950 Cluster: Vacuolar segregation protein 7; n=2; Sa... 31 6.7
UniRef50_A7J735 Cluster: Putative uncharacterized protein N331R;... 30 8.8
UniRef50_A6GL77 Cluster: Sensor protein; n=1; Limnobacter sp. ME... 30 8.8
UniRef50_Q2QVL9 Cluster: Transposon protein, putative, Mutator s... 30 8.8
UniRef50_Q10S86 Cluster: Bromodomain containing protein, express... 30 8.8
>UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120;
Fungi/Metazoa group|Rep: 60S ribosomal protein L18a -
Homo sapiens (Human)
Length = 176
Score = 93.1 bits (221), Expect = 1e-18
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F
Sbjct: 108 QCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 167
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 168 TTKRPNTFF 176
>UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 153
Score = 66.9 bits (156), Expect = 8e-11
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1
Query: 22 YRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTFAY 201
Y +RHRARAHSI+IIKVE +K + +KQF++S IRF L +R HH + F++
Sbjct: 88 YSGTPSRHRARAHSIKIIKVESVKTSKTRRVHIKQFYDSKIRFLLVQRYHHKRYRKLFSF 147
Query: 202 KRPSTY 219
+P TY
Sbjct: 148 CQPDTY 153
>UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=9;
Aconoidasida|Rep: 60S ribosomal protein L18, putative -
Theileria parva
Length = 191
Score = 60.9 bits (141), Expect = 5e-09
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +1
Query: 13 NQGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLN- 189
+Q Y DM RHRARA IQII+V I + C P+V Q H ++FP+ K + H +R +
Sbjct: 120 SQMYGDMAGRHRARASCIQIIRVAEISDSDCKKPKVTQMHGKKLKFPILKPMPHVERKDR 179
Query: 190 -TFAYKRPS 213
F+ KRPS
Sbjct: 180 KLFSTKRPS 188
>UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2;
Eukaryota|Rep: Ribosomal protein L18a - Dictyostelium
discoideum AX4
Length = 191
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +1
Query: 13 NQGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNT 192
+Q Y +M +RH AR SI II ++ I A+ KQFH+S I+FPL R+ K +T
Sbjct: 123 SQMYDEMASRHSARESSIHIIDIKEIAASLTRRANTKQFHDSKIKFPLTHRI--AKSKST 180
Query: 193 FAYKRPSTYF 222
F RP+T+F
Sbjct: 181 FVANRPNTFF 190
>UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 532
Score = 56.4 bits (130), Expect = 1e-07
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 22 YRDMGARHRARAHSIQIIKV-EVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTFA 198
Y+DM ARHRAR SI I+K+ E+ K+ P +KQ ++FPLP R + + TFA
Sbjct: 467 YQDMAARHRARFASIHILKIAEIEKSEDVKRPYIKQLMAPGLKFPLPHR--RPRHVGTFA 524
Query: 199 YKRPSTYF 222
+RP+T++
Sbjct: 525 GQRPNTFY 532
>UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24;
Viridiplantae|Rep: 60S ribosomal protein L18a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 178
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPL 156
Q Y +M +RHR R IQIIK + A C KQFHNS I+FPL
Sbjct: 107 QMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPL 153
>UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6;
Dikarya|Rep: 60S ribosomal protein L20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 176
Score = 51.2 bits (117), Expect = 4e-06
Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Frame = +1
Query: 22 YRDMGARHRARAHSIQIIK-VEVIKAAACXXPQVKQFHNSTIRFPLPKR---VHHYKRLN 189
Y DM ARHRAR SI+I+K VEV K VKQ N ++FPLP R V
Sbjct: 106 YADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKK 165
Query: 190 TFAYKRPSTYF 222
FA RPST++
Sbjct: 166 VFAPHRPSTFY 176
>UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L18a -
Cryptosporidium hominis
Length = 185
Score = 49.6 bits (113), Expect = 1e-05
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 13 NQGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRL-- 186
+Q Y ++ HRA+ SIQII+V I A P+ QF NS ++FP +++ +
Sbjct: 113 SQMYEELAGSHRAQRSSIQIIRVSQIDAKLAKRPKTTQFFNSKLKFPAIRKLPMAPKALR 172
Query: 187 NTFAYKRPSTY 219
+TF RP+T+
Sbjct: 173 STFTASRPTTF 183
>UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18a,
putative - Leishmania major
Length = 179
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 13 NQGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKR 165
+Q Y D+ +RHRAR H+I+++ V+ I + Q+H + FPL +R
Sbjct: 106 SQAYHDLASRHRARYHNIEVLNVKSIPDHEVKHLSIAQYHAPNLSFPLLQR 156
>UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L18a
- Ostreococcus tauri
Length = 254
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 22 YRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRV--HHYKRLNT- 192
Y +M +RHR R+ +QIIK+ + +QF + FP+ +V H K T
Sbjct: 184 YEEMASRHRVRSSQLQIIKIAEVSDENVRRENTRQFLAEDLSFPVVNKVMRHPSKATKTI 243
Query: 193 FAYKRPS 213
F YKRP+
Sbjct: 244 FKYKRPN 250
>UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia ATCC
50803|Rep: GLP_7_3170_2649 - Giardia lamblia ATCC 50803
Length = 173
Score = 37.5 bits (83), Expect = 0.058
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 22 YRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKR 183
Y +M + RAR H IQII V+ + +V F +RFP P H KR
Sbjct: 104 YSEMAGQCRARYHDIQIINVKEVADEDVRREKVAMFTQKGVRFPHPCPYVHVKR 157
>UniRef50_UPI0000E802DD Cluster: PREDICTED: hypothetical protein;
n=4; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 213
Score = 35.9 bits (79), Expect = 0.18
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 89 SRLLXVAVHRSNSSTTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITINPCKK 268
SR + +AVH+ + ST P + CP C T S G + N ++ I +N C K
Sbjct: 139 SRQITLAVHKQHGSTEHPDEGKCP--CAWTDSFCTSLDMGTSGMRWNLDLLSIAMNSCSK 196
>UniRef50_A0LUL4 Cluster: Secreted protein precursor; n=1;
Acidothermus cellulolyticus 11B|Rep: Secreted protein
precursor - Acidothermus cellulolyticus (strain ATCC
43068 / 11B)
Length = 201
Score = 33.9 bits (74), Expect = 0.71
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 79 VEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 222
+E ++AAA P ++FHN +R L R H RL A +RP F
Sbjct: 120 IEELEAAATKIPLARRFHNDAVRATLAVRRHRLVRLLRLA-RRPEPAF 166
>UniRef50_Q4PCW3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3743
Score = 33.9 bits (74), Expect = 0.71
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 119 SNSSTTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVR 241
S+S+ S S C +V T T D +PSR G+++T N +R
Sbjct: 638 SSSNALLASVSDCSDVFTPTHDSLPSRELGVSVTGLNLELR 678
>UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L18A -
Guillardia theta (Cryptomonas phi)
Length = 159
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPL 156
Q Y ++G R + + + I++VE IK VKQF I +P+
Sbjct: 102 QFYIELGGRFKIKPKDVTILRVERIKEIESSKSNVKQFLGKKINYPI 148
>UniRef50_UPI00006CA9E6 Cluster: hypothetical protein
TTHERM_00326950; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00326950 - Tetrahymena
thermophila SB210
Length = 3415
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 2 GTRVIKAIEIWELDTEPELTQYRSSKWK*SRL 97
GTRV AIEIW+ D+ +T++ KW SR+
Sbjct: 65 GTRV-GAIEIWDYDSREIITKFFEDKWPISRI 95
>UniRef50_A1B1P4 Cluster: Cobalamin synthesis protein, P47K; n=1;
Paracoccus denitrificans PD1222|Rep: Cobalamin synthesis
protein, P47K - Paracoccus denitrificans (strain Pd
1222)
Length = 404
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = -2
Query: 264 LHGFIVM*RTLQLQEVSARPLVREGIKSLVVVHTFGQWESDGAVVE 127
L+GF+ +T LQ + + V G++ V+V+ G+ + DGA+++
Sbjct: 9 LNGFLGAGKTTLLQSLLVQARVMPGVRLGVIVNEMGELDIDGAILD 54
>UniRef50_P53950 Cluster: Vacuolar segregation protein 7; n=2;
Saccharomyces cerevisiae|Rep: Vacuolar segregation
protein 7 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1165
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 95 LLXVAVHRSNSSTTAPSDSHCPNVCTTTRDLIPSRTRGLALTSCNCNVRHITIN 256
L V+ H +S+++ + CPNV T +++L P+ + N +RH + N
Sbjct: 603 LSKVSPHLLSSTSSNGNTISCPNVATNSQELEPNNDISTKKSLSNSTLRHSSAN 656
>UniRef50_A7J735 Cluster: Putative uncharacterized protein N331R;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein N331R - Chlorella virus
FR483
Length = 373
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 113 HRSNSSTTAPSDSHCPNVCTTTRDLIPSRTRGLALTS 223
++ +SSTT+PS CP C++ + ++ RG+ + S
Sbjct: 95 NKPDSSTTSPSRDTCPASCSSEQAMVYVSPRGIRMQS 131
>UniRef50_A6GL77 Cluster: Sensor protein; n=1; Limnobacter sp.
MED105|Rep: Sensor protein - Limnobacter sp. MED105
Length = 905
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -2
Query: 225 QEVSARPLVREGIKSLVVVHTFGQWESDGAVVELFDLWTATXSSLDYFHFDD 70
Q V+AR + R + LV+ HT + ++ + + + + + LD+ HF D
Sbjct: 42 QSVAARKISRLSTRMLVLTHTASTYMTETNIRQWWVVHQSISDELDHLHFSD 93
>UniRef50_Q2QVL9 Cluster: Transposon protein, putative, Mutator
sub-class, expressed; n=4; Oryza sativa|Rep: Transposon
protein, putative, Mutator sub-class, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 478
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 63 NTDHQSGSNQGCCXXXSTG----QTVPQQHHQIPIAQTCAP 173
N H G N+G T QT P+QH Q+PI T P
Sbjct: 406 NNHHHQGGNRGGAHHVGTPPNQQQTKPEQHPQLPIGATKQP 446
>UniRef50_Q10S86 Cluster: Bromodomain containing protein, expressed;
n=4; Oryza sativa|Rep: Bromodomain containing protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 722
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 48 SPSSLNTDHQSGSNQGCCXXXSTGQTVPQQHH 143
S + L T ++G+N C STGQT P Q H
Sbjct: 561 SATKLATKCENGANVSCDGVGSTGQTPPLQQH 592
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,235,010
Number of Sequences: 1657284
Number of extensions: 4284271
Number of successful extensions: 11520
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11514
length of database: 575,637,011
effective HSP length: 66
effective length of database: 466,256,267
effective search space used: 10257637874
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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