Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060363.seq
(268 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 93 1e-19
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 93 1e-19
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 93 1e-19
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 93 1e-19
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 93 1e-19
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 93 1e-19
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 91 4e-19
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 89 2e-18
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 47 1e-05
X83956-1|CAA58787.1| 330|Homo sapiens hACCA orphan receptor pro... 28 4.7
U18550-1|AAB60402.1| 330|Homo sapiens protein ( Human GPR3 G pr... 28 4.7
U13668-1|AAA64594.1| 292|Homo sapiens G protein-coupled recepto... 28 4.7
S45332-1|AAB23271.1| 508|Homo sapiens erythropoietin receptor p... 28 4.7
M60459-1|AAA52403.1| 508|Homo sapiens erythropoietin receptor p... 28 4.7
M34986-1|AAA52401.1| 508|Homo sapiens EPOR protein. 28 4.7
L32831-1|AAA73560.1| 330|Homo sapiens G protein-coupled recepto... 28 4.7
BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2 (Drosoph... 28 4.7
BC112153-1|AAI12154.1| 508|Homo sapiens erythropoietin receptor... 28 4.7
BC032702-1|AAH32702.1| 330|Homo sapiens G protein-coupled recep... 28 4.7
AL096774-5|CAC18517.1| 330|Homo sapiens G protein-coupled recep... 28 4.7
AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein. 28 4.7
AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellula... 28 4.7
AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein. 28 4.7
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 93.1 bits (221), Expect = 1e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F
Sbjct: 108 QCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 167
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 168 TTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 93.1 bits (221), Expect = 1e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F
Sbjct: 108 QCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 167
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 168 TTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 93.1 bits (221), Expect = 1e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F
Sbjct: 108 QCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 167
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 168 TTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 93.1 bits (221), Expect = 1e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F
Sbjct: 108 QCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 167
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 168 TTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 93.1 bits (221), Expect = 1e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F
Sbjct: 108 QCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 167
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 168 TTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 93.1 bits (221), Expect = 1e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F
Sbjct: 108 QCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 167
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 168 TTKRPNTFF 176
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTF 195
Q YRDMGARHRARAHSIQI+KVE I + C P VKQFH+S I+FPLP RV + F
Sbjct: 72 QCYRDMGARHRARAHSIQIMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRF 131
Query: 196 AYKRPSTYF 222
KRP+T+F
Sbjct: 132 TTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/66 (63%), Positives = 49/66 (74%)
Frame = +1
Query: 25 RDMGARHRARAHSIQIIKVEVIKAAACXXPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 204
RDMGARHRARAHSIQI+KVE I A+ C P VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 205 RPSTYF 222
RP+T+F
Sbjct: 61 RPNTFF 66
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 16 QGYRDMGARHRARAHSIQIIKVEVIKAA 99
Q YRDMGARHRARAHSIQI+ VE I A+
Sbjct: 108 QCYRDMGARHRARAHSIQIMMVEEIAAS 135
>X83956-1|CAA58787.1| 330|Homo sapiens hACCA orphan receptor
protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 191 VLSLL*WCTRLGNGNLMVLLWNCL----TCG 111
V+ L W LG G L VL WNCL TCG
Sbjct: 155 VMLALVWGGALGLGLLPVLAWNCLDGLTTCG 185
>U18550-1|AAB60402.1| 330|Homo sapiens protein ( Human GPR3 G
protein-coupled receptor gene, complete cds. ).
Length = 330
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 191 VLSLL*WCTRLGNGNLMVLLWNCL----TCG 111
V+ L W LG G L VL WNCL TCG
Sbjct: 155 VMLALVWGGALGLGLLPVLAWNCLDGLTTCG 185
>U13668-1|AAA64594.1| 292|Homo sapiens G protein-coupled receptor
protein.
Length = 292
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 191 VLSLL*WCTRLGNGNLMVLLWNCL----TCG 111
V+ L W LG G L VL WNCL TCG
Sbjct: 155 VMLALVWGGALGLGLLPVLAWNCLDGLTTCG 185
>S45332-1|AAB23271.1| 508|Homo sapiens erythropoietin receptor
protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 48 SPSSLNTDHQSGSNQGCCXXXSTG-QTVPQQHHQIPIAQTCAP 173
S S ++TD+ SG +QG S G + P ++ IP A+ P
Sbjct: 460 SDSGISTDYSSGDSQGAQGGLSDGPYSNPYENSLIPAAEPLPP 502
>M60459-1|AAA52403.1| 508|Homo sapiens erythropoietin receptor
protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 48 SPSSLNTDHQSGSNQGCCXXXSTG-QTVPQQHHQIPIAQTCAP 173
S S ++TD+ SG +QG S G + P ++ IP A+ P
Sbjct: 460 SDSGISTDYSSGDSQGAQGGLSDGPYSNPYENSLIPAAEPLPP 502
>M34986-1|AAA52401.1| 508|Homo sapiens EPOR protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 48 SPSSLNTDHQSGSNQGCCXXXSTG-QTVPQQHHQIPIAQTCAP 173
S S ++TD+ SG +QG S G + P ++ IP A+ P
Sbjct: 460 SDSGISTDYSSGDSQGAQGGLSDGPYSNPYENSLIPAAEPLPP 502
>L32831-1|AAA73560.1| 330|Homo sapiens G protein-coupled receptor
GPR3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 191 VLSLL*WCTRLGNGNLMVLLWNCL----TCG 111
V+ L W LG G L VL WNCL TCG
Sbjct: 155 VMLALVWGGALGLGLLPVLAWNCLDGLTTCG 185
>BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2
(Drosophila) protein.
Length = 1529
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 122 NSSTTAPSDS--HCPNVCTTTRDLIPSRTRGL 211
+ S APS S HCP CT + +++ R +GL
Sbjct: 260 HQSFMAPSCSVLHCPAACTCSNNIVDCRGKGL 291
>BC112153-1|AAI12154.1| 508|Homo sapiens erythropoietin receptor
protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 48 SPSSLNTDHQSGSNQGCCXXXSTG-QTVPQQHHQIPIAQTCAP 173
S S ++TD+ SG +QG S G + P ++ IP A+ P
Sbjct: 460 SDSGISTDYSSGDSQGAQGGLSDGPYSNPYENSLIPAAEPLPP 502
>BC032702-1|AAH32702.1| 330|Homo sapiens G protein-coupled receptor
3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 191 VLSLL*WCTRLGNGNLMVLLWNCL----TCG 111
V+ L W LG G L VL WNCL TCG
Sbjct: 155 VMLALVWGGALGLGLLPVLAWNCLDGLTTCG 185
>AL096774-5|CAC18517.1| 330|Homo sapiens G protein-coupled receptor
3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 191 VLSLL*WCTRLGNGNLMVLLWNCL----TCG 111
V+ L W LG G L VL WNCL TCG
Sbjct: 155 VMLALVWGGALGLGLLPVLAWNCLDGLTTCG 185
>AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein.
Length = 1525
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 122 NSSTTAPSDS--HCPNVCTTTRDLIPSRTRGL 211
+ S APS S HCP CT + +++ R +GL
Sbjct: 264 HQSFMAPSCSVLHCPAACTCSNNIVDCRGKGL 295
>AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellular
slit protein Slit2 protein.
Length = 1521
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 122 NSSTTAPSDS--HCPNVCTTTRDLIPSRTRGL 211
+ S APS S HCP CT + +++ R +GL
Sbjct: 260 HQSFMAPSCSVLHCPAACTCSNNIVDCRGKGL 291
>AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein.
Length = 1529
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 122 NSSTTAPSDS--HCPNVCTTTRDLIPSRTRGL 211
+ S APS S HCP CT + +++ R +GL
Sbjct: 260 HQSFMAPSCSVLHCPAACTCSNNIVDCRGKGL 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,637,883
Number of Sequences: 237096
Number of extensions: 690728
Number of successful extensions: 1727
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 76,859,062
effective HSP length: 66
effective length of database: 61,210,726
effective search space used: 1346635972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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