Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060362.seq
(497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 173 8e-44
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 173 8e-44
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 173 8e-44
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 173 8e-44
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 173 8e-44
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 173 8e-44
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 171 2e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 170 6e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 165 2e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 134 3e-32
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 128 2e-30
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 128 2e-30
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 127 4e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 127 4e-30
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 103 7e-23
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 81 3e-16
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 62 2e-10
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 5e-07
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 39 0.002
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.050
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.050
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 5.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 5.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 5.7
U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical pr... 27 10.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 173 bits (420), Expect = 8e-44
Identities = 88/133 (66%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 173 bits (420), Expect = 8e-44
Identities = 88/133 (66%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 173 bits (420), Expect = 8e-44
Identities = 88/133 (66%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 173 bits (420), Expect = 8e-44
Identities = 88/133 (66%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 173 bits (420), Expect = 8e-44
Identities = 88/133 (66%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 173 bits (420), Expect = 8e-44
Identities = 88/133 (66%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 171 bits (417), Expect = 2e-43
Identities = 87/133 (65%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (413), Expect = 6e-43
Identities = 85/133 (63%), Positives = 92/133 (69%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKX 441
+K + P PVLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 442 TQIMFETFNTPAM 480
TQIMFETFNTPAM
Sbjct: 121 TQIMFETFNTPAM 133
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 165 bits (401), Expect = 2e-41
Identities = 84/131 (64%), Positives = 90/131 (68%)
Frame = +1
Query: 88 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAK 267
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 268 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQ 447
+ P PVLLTEAPLNPK+NR K TQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 448 IMFETFNTPAM 480
IMFETFNTPAM
Sbjct: 122 IMFETFNTPAM 132
Score = 103 bits (246), Expect = 9e-23
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEH
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEH 101
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 134 bits (324), Expect = 3e-32
Identities = 70/115 (60%), Positives = 74/115 (64%)
Frame = +1
Query: 136 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKXXXXXXXXXXXXXXXL 315
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 316 TGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQIMFETFNTPAM 480
+ P PVLLTEAPLNPKANR K TQIMFETFNTPAM
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 119
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 45 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 88
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 128 bits (310), Expect = 2e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 64.1 bits (149), Expect = 5e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKI 338
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 128 bits (310), Expect = 2e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 64.1 bits (149), Expect = 5e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKI 338
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 127 bits (307), Expect = 4e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 64.1 bits (149), Expect = 5e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKI 338
AQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 127 bits (307), Expect = 4e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 262 AK 267
+K
Sbjct: 61 SK 62
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDM 329
AQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 103 bits (247), Expect = 7e-23
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 15 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 58
Score = 80.2 bits (189), Expect = 8e-16
Identities = 45/89 (50%), Positives = 48/89 (53%)
Frame = +1
Query: 214 MVGMGQKDSYVGDEHRAKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPV 393
MVGMGQKDSYVGDE ++K + P PV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 394 LLTEAPLNPKANRXKXTQIMFETFNTPAM 480
LLTEAPLNPKANR K TQIMFETFNTPAM
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAM 89
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 81.4 bits (192), Expect = 3e-16
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKXXXXXX 285
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G + +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 286 XXXXXXXXXLTGMTWRR-FGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQIMFET 462
+ + I P PVLLT+APLNP NR + +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 463 FNTPAM 480
FN PA+
Sbjct: 131 FNVPAL 136
Score = 65.3 bits (152), Expect = 2e-11
Identities = 25/45 (55%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEH 386
A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEH
Sbjct: 61 AESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 62.5 bits (145), Expect = 2e-10
Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE----HRAK 267
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 268 XXXXXXXXXXXXXXXLTGMTW-RRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXT 444
W FG P + P+ +LLTE PLNP +NR K
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFG--PEKLDI--DPKECKLLLTEPPLNPNSNREKMF 124
Query: 445 QIMFETF 465
Q+MFE +
Sbjct: 125 QVMFEQY 131
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 210 RDGRYGTEGLLCRR*AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEE 383
R G + L+ R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 50.8 bits (116), Expect = 5e-07
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 279 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Score = 48.0 bits (109), Expect = 4e-06
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Frame = +1
Query: 82 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 225
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 226 GQKDSYVGDEHRAKXXXXXXXXXXXXXXXLTGMT-WRRFGIIPSTMSCVSPPRNTPVLLT 402
D ++GDE + + R+ + P + LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 403 EAPLNPKANRXKXTQIMFETFNTPAM 480
E PLN NR +IMFE+FN P +
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGL 146
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 370 SPPRNTPVLLTEAPLNPKANRXKXTQIMFETFNTPA 477
S P PVL +E+ N +A R K T+IMFE F PA
Sbjct: 119 SNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPA 154
Score = 33.5 bits (73), Expect = 0.087
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 189
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 294 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
++ G++ +W+ EKI H++ N L P EH
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEH 124
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.050
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTF 353
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.050
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTF 353
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 186 RGKAPPSGRDGRYGTEGLLCRR*AQSKRG 272
RGKA +GRDGR G EG R Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 343 CQIFSMSSQLVTIPC-SMGYLRVRIPLLLCAHLLHKSPSVP-YRPSRPD 203
CQ+FS QLVT+ SMG +++++ + L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 136 KAGFAGDDAPRAVFPSIVGRPRHQG 210
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 161 ASSPAKPALHIPEPLSTTNAATSS 90
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>U40028-7|AAA81118.1| 155|Caenorhabditis elegans Hypothetical
protein T05A7.3 protein.
Length = 155
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 349 PSTMSCVSPPRNTPVLLTEAPLNP 420
P+ ++C P PV++T AP NP
Sbjct: 25 PTGITCGPPTPAPPVIITPAPTNP 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,175,281
Number of Sequences: 27780
Number of extensions: 270630
Number of successful extensions: 960
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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