Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060362.seq
(497 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 149 1e-36
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 149 1e-36
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 149 1e-36
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 147 4e-36
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 146 7e-36
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 146 7e-36
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 143 7e-35
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 143 7e-35
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 143 7e-35
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 132 1e-31
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 97 8e-21
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 87 5e-18
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 60 6e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 6e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 8e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 54 5e-08
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 49 2e-06
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 36 0.011
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.061
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 31 0.57
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 4.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 4.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.3
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 5.3
At4g30070.1 68417.m04277 plant defensin-fusion protein, putative... 27 7.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 149 bits (361), Expect = 1e-36
Identities = 77/130 (59%), Positives = 84/130 (64%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P PVLLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFNTPAM
Sbjct: 125 MFETFNTPAM 134
Score = 101 bits (243), Expect = 2e-22
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH 103
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 149 bits (360), Expect = 1e-36
Identities = 77/130 (59%), Positives = 84/130 (64%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P PVLLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFNTPAM
Sbjct: 125 MFETFNTPAM 134
Score = 101 bits (242), Expect = 3e-22
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 149 bits (360), Expect = 1e-36
Identities = 77/130 (59%), Positives = 84/130 (64%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P PVLLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFNTPAM
Sbjct: 125 MFETFNTPAM 134
Score = 101 bits (242), Expect = 3e-22
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 147 bits (356), Expect = 4e-36
Identities = 76/130 (58%), Positives = 83/130 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P PVLLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFN PAM
Sbjct: 125 MFETFNVPAM 134
Score = 101 bits (243), Expect = 2e-22
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 60 AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH 103
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 146 bits (354), Expect = 7e-36
Identities = 75/130 (57%), Positives = 83/130 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P P+LLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFN PAM
Sbjct: 125 MFETFNAPAM 134
Score = 101 bits (242), Expect = 3e-22
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 146 bits (354), Expect = 7e-36
Identities = 75/130 (57%), Positives = 83/130 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDE ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P P+LLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFN PAM
Sbjct: 125 MFETFNAPAM 134
Score = 101 bits (242), Expect = 3e-22
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 60 AQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEH 103
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 143 bits (346), Expect = 7e-35
Identities = 72/130 (55%), Positives = 83/130 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P PVLLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFN+PAM
Sbjct: 125 MFETFNSPAM 134
Score = 101 bits (241), Expect = 4e-22
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEH
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEH 103
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 143 bits (346), Expect = 7e-35
Identities = 72/130 (55%), Positives = 83/130 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P PVLLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFN+PAM
Sbjct: 125 MFETFNSPAM 134
Score = 101 bits (241), Expect = 4e-22
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEH
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEH 103
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 143 bits (346), Expect = 7e-35
Identities = 72/130 (55%), Positives = 83/130 (63%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDE ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P PVLLTEAPLNPKANR K TQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 451 MFETFNTPAM 480
MFETFN+PAM
Sbjct: 125 MFETFNSPAM 134
Score = 101 bits (241), Expect = 4e-22
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEH
Sbjct: 60 AQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEH 103
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 132 bits (320), Expect = 1e-31
Identities = 67/130 (51%), Positives = 81/130 (62%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKX 270
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDE +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 271 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQI 450
+ P P+LLTEAPLNPK NR K TQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 451 MFETFNTPAM 480
MFE+F P+M
Sbjct: 126 MFESFAFPSM 135
Score = 94.3 bits (224), Expect = 4e-20
Identities = 37/44 (84%), Positives = 43/44 (97%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
AQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEH
Sbjct: 61 AQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEH 104
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 96.7 bits (230), Expect = 8e-21
Identities = 54/125 (43%), Positives = 65/125 (52%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKXXXXXX 285
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 286 XXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQIMFETF 465
+ P PVLLTEAP NPKANR K TQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 466 NTPAM 480
+ PAM
Sbjct: 119 DVPAM 123
Score = 82.6 bits (195), Expect = 1e-16
Identities = 38/59 (64%), Positives = 42/59 (71%)
Frame = +3
Query: 210 RDGRYGTEGLLCRR*AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
RDG E + + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEH
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEH 92
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 87.4 bits (207), Expect = 5e-18
Identities = 34/44 (77%), Positives = 42/44 (95%)
Frame = +3
Query: 255 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEH
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEH 58
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/89 (39%), Positives = 42/89 (47%)
Frame = +1
Query: 214 MVGMGQKDSYVGDEHRAKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPV 393
MVGM + D +VGD+ A+ + P PV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 394 LLTEAPLNPKANRXKXTQIMFETFNTPAM 480
LLTEAPLNPKA+R K TQIMFETF P+M
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSM 89
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 60.5 bits (140), Expect = 6e-10
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEHRAKXXXX 279
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 280 XXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQIMFE 459
P + +LLT+ PLNP NR K + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 460 TFN 468
+N
Sbjct: 127 KYN 129
Score = 58.4 bits (135), Expect = 2e-09
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 383
L + YP+ +GIV NWDDME +W H FYNEL++ P +
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
+R + + P + GIVT+WD ++ +W H F N L + P EH
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEH 119
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 8e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 91 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 192
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 40.7 bits (91), Expect = 5e-04
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 264 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
+R + + PI+ GIV++WD ++ IW H F + L + P EH
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEH 125
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 361 SCVS-PPRNTPVLLTEAPLNPKANRXKXTQIMFETFNTPAM 480
SC+ P P+LL E PLN + R K ++MFE + PA+
Sbjct: 116 SCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPAL 156
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 54.0 bits (124), Expect = 5e-08
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEHRAKXXXXXX 285
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD +
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 286 XXXXXXXXXLTGMTWRRFGIIP-------STMSCVSPPRNTPVLLTEAPLNPKANRXKXT 444
+ + + +F I+ + + P+L+TE NP +R K
Sbjct: 78 TRSGPRSPFDSNVVY-QFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMA 136
Query: 445 QIMFETFNTPAM 480
+++FET+ PA+
Sbjct: 137 ELLFETYGVPAV 148
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 386
L YPIEHG V +WD ME+ W +N LR PE+H
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDH 120
Score = 46.0 bits (104), Expect = 1e-05
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Frame = +1
Query: 103 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 228
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 229 QKDSYVGDEHRAKXXXXXXXXXXXXXXXLTGMTW---RRFG--IIPSTMSCVSPPRNTPV 393
D Y+GDE AK W R+ I + + C P +
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRC--DPEDHYF 122
Query: 394 LLTEAPLNPKANRXKXTQIMFETFNTPAM 480
LLTE+PL P +R +I+FETFN P +
Sbjct: 123 LLTESPLTPPESREYTGEILFETFNVPGL 151
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 36.3 bits (80), Expect = 0.011
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +1
Query: 106 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD-EHRAKXXXXX 282
+V+DNG G+ KAG G+ P V P+ + +P + + + + +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSDEIDLTSAAVRRP 64
Query: 283 XXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTPVLLTEAPLNPKANRXKXTQIMFET 462
L W + S + P ++ +LLTEAPL+ + + +++FE
Sbjct: 65 IDRGYLINSDLQREIWSH--LFTSLLHIA--PSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 463 FNTPAMXRRHP 495
F ++ HP
Sbjct: 121 FGFSSLYIAHP 131
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 282 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 377
++ PI+ G + N D +IW H F + L +AP
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAP 92
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.061
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 227 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 90
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 30.7 bits (66), Expect = 0.57
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 391 VLLTEAPLNPKANRXKXTQIMFETFN 468
+L T+ PKA R + Q+MFETFN
Sbjct: 91 ILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 291 PIEHGIVTNWDDMEKIWHHTFYNEL 365
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 377
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 276 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 377
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 203 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 81
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 307 IPCSMGYLRVRIPLLLCAHLLHKSPSVPYRPS 212
+ + Y R+R C L H+ P PY PS
Sbjct: 193 VKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224
>At4g30070.1 68417.m04277 plant defensin-fusion protein, putative
contains a C-terminal plant defensin domain, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be)
Length = 129
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 280 VRIPLLLCAHLLHKSPSVPYRPSRPDGGA 194
V +PL C + PS P P + DGGA
Sbjct: 59 VGVPLCKCYYECESPPSPPAPPKKCDGGA 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,675,782
Number of Sequences: 28952
Number of extensions: 257526
Number of successful extensions: 759
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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