Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060361.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p pro...   126   3e-29
AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA...   126   3e-29
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   4.5  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   4.5  

>AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p
           protein.
          Length = 387

 Score =  126 bits (304), Expect = 3e-29
 Identities = 53/84 (63%), Positives = 70/84 (83%)
 Frame = +1

Query: 256 VCDACFKEPSESDIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSL 435
           VCD CFK+   S I+ ILNSIVSIM++IPL+RGEN++LA+ +++TKAP   LG V LQSL
Sbjct: 49  VCDVCFKDGEPSQIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSL 108

Query: 436 WRLYNNLEPNSPLRYHVYYHVIEL 507
           WRL+NNL+  SPLRYHVYYH++++
Sbjct: 109 WRLFNNLDTASPLRYHVYYHLVQV 132



 Score = 85.0 bits (201), Expect = 9e-17
 Identities = 39/53 (73%), Positives = 46/53 (86%)
 Frame = +3

Query: 525 VREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHXVLKXQNSELAAKVMIELLG 683
           V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V K  N EL++KVMIELLG
Sbjct: 139 VLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIELLG 191



 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = +2

Query: 113 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVG 256
           M    VF+D+SL++Q  ELR+YFK LGAEIS EKS KG+EDDLHKI+G
Sbjct: 1   MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIG 48


>AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA
           protein.
          Length = 387

 Score =  126 bits (304), Expect = 3e-29
 Identities = 53/84 (63%), Positives = 70/84 (83%)
 Frame = +1

Query: 256 VCDACFKEPSESDIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSL 435
           VCD CFK+   S I+ ILNSIVSIM++IPL+RGEN++LA+ +++TKAP   LG V LQSL
Sbjct: 49  VCDVCFKDGEPSQIDGILNSIVSIMITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSL 108

Query: 436 WRLYNNLEPNSPLRYHVYYHVIEL 507
           WRL+NNL+  SPLRYHVYYH++++
Sbjct: 109 WRLFNNLDTASPLRYHVYYHLVQV 132



 Score = 85.0 bits (201), Expect = 9e-17
 Identities = 39/53 (73%), Positives = 46/53 (86%)
 Frame = +3

Query: 525 VREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHXVLKXQNSELAAKVMIELLG 683
           V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V K  N EL++KVMIELLG
Sbjct: 139 VLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIELLG 191



 Score = 72.1 bits (169), Expect = 6e-13
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = +2

Query: 113 MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVG 256
           M    VF+D+SL++Q  ELR+YFK LGAEIS EKS KG+EDDLHKI+G
Sbjct: 1   MTSHPVFIDLSLDEQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIG 48


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 158  ALELRRYFKSLGAEISEEKSPKGIED 235
            ++ LRR+++ L  E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 158  ALELRRYFKSLGAEISEEKSPKGIED 235
            ++ LRR+++ L  E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,256,109
Number of Sequences: 53049
Number of extensions: 491748
Number of successful extensions: 1248
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)