Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060359.seq
(677 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 127 3e-28
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 123 5e-27
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 122 6e-27
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 117 3e-25
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 117 3e-25
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 110 3e-23
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 101 2e-20
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 100 3e-20
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 99 5e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 100 6e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 100 6e-20
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 96 8e-19
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 95 1e-18
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 93 7e-18
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 84 3e-15
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 78 2e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 74 3e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 56 1e-06
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 50 7e-05
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 46 0.001
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 45 0.001
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 45 0.001
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 44 0.005
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 43 0.008
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 39 0.13
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 38 0.22
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 38 0.30
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.69
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.91
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 36 0.91
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 35 2.1
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.1
UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;... 34 2.8
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 34 3.7
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 3.7
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 4.8
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.8
UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q5TV94 Cluster: ENSANGP00000029021; n=2; cellular organ... 33 6.4
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 6.4
UniRef50_Q2CHG8 Cluster: Type I secretion target repeat protein;... 33 8.4
UniRef50_Q120B1 Cluster: Enoyl-CoA hydratase/isomerase; n=4; Pro... 33 8.4
UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;... 33 8.4
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 33 8.4
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 33 8.4
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 127 bits (306), Expect = 3e-28
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.042
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 123 bits (296), Expect = 5e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3
Query: 75 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 122 bits (295), Expect = 6e-27
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 175 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +3
Query: 108 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 254
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS E
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVE 174
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 117 bits (281), Expect = 3e-25
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 34 AGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 117 bits (281), Expect = 3e-25
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 57 AGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +3
Query: 90 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 254
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEK 56
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 110 bits (264), Expect = 3e-23
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = +2
Query: 251 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 415
GAG++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 245
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 101 bits (242), Expect = 2e-20
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
+G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 57 SGYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWH 111
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +3
Query: 93 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 100 bits (240), Expect = 3e-20
Identities = 44/55 (80%), Positives = 47/55 (85%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 59 AGHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 248
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVS 56
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*A--PQGMX*YPLRXQ-VXRLXAGKGKMRNR 674
I +PEL LV+ +++Q INKT A +G+ R + + GKGKMRNR
Sbjct: 145 INNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNR 202
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 99 bits (238), Expect = 5e-20
Identities = 44/55 (80%), Positives = 44/55 (80%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AG Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 59 AGMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWH 113
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 96 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 254
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQ 58
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.5 bits (237), Expect = 6e-20
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
+G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 57 SGYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWH 111
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +3
Query: 87 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 99.5 bits (237), Expect = 6e-20
Identities = 46/62 (74%), Positives = 49/62 (79%)
Frame = +2
Query: 233 ALLREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 412
A+ R G H SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RR
Sbjct: 52 AVNRLSGMNH--SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRR 109
Query: 413 WH 418
WH
Sbjct: 110 WH 111
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +3
Query: 90 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
Score = 34.3 bits (75), Expect = 2.8
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQA-ASX*APQGMX*YPLRXQVXRLXAGKGKMRNR 674
I +PE+ LVV D +Q KTK+A A A + + AG+GKMRNR
Sbjct: 143 IGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNR 198
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 95.9 bits (228), Expect = 8e-19
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 58 AGHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 99 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 239
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52
Score = 38.3 bits (85), Expect = 0.17
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
I+ +PEL LVV D V++I KTK+A A + + R+ G GK RNR
Sbjct: 144 IDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNR 199
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 95.5 bits (227), Expect = 1e-18
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AG TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 53 AGMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 37.1 bits (82), Expect = 0.39
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*APQGMX*YPLRXQVXRLXAGKGKMRNR 674
++ IPE+ V+ D +++I KT+ G+ +L +GKGKMRNR
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTLGINSIVRNKLKRKLKSGKGKMRNR 193
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 92.7 bits (220), Expect = 7e-18
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +2
Query: 248 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 415
+ AG Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 53 KNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 35.1 bits (77), Expect = 1.6
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 102 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ Y TV+ LP VF PIR DLV + +RQPY VSK
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSK 53
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 83.8 bits (198), Expect = 3e-15
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 415
AG Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 58 AGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +3
Query: 90 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 248
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVS 55
Score = 33.1 bits (72), Expect = 6.4
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR--LHLXERLKAWXDIL 621
VPALV ARGH + P P + +KS + + ++L +++ A+ D+L
Sbjct: 133 VPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVL 182
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 78.2 bits (184), Expect = 2e-13
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +2
Query: 239 LREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
++ +G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 54 IKYNNSGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 415
AG + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 55 AGKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +3
Query: 87 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 239
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/54 (53%), Positives = 32/54 (59%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 415
AG Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 54 AGVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +3
Query: 96 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
P V V+ V A P P VF P+RPD++N VH + K R PY VS+
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +2
Query: 248 QGAGHQTSAESWGTGRAVARIPRVRGGG 331
+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 46 ESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*APQGMX*YPLR-XQVXRLXAGKGKMRNR 674
++ + E+ LVV DK+QEINKTKQA L+ + RL AGKGKMRNR
Sbjct: 9 VDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 415
AG +TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 52 AGFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 RFYVQELEAALL---REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 376
R ++ E A L R+ AG +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 377 GRMFAPTK 400
GR P +
Sbjct: 101 GRAAHPPR 108
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = +2
Query: 248 QGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
+GAG + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
Score = 35.1 bits (77), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*APQGMX*YPLR-XQVXRLXAGKGKMRNR 674
+EK+P L +VV ++IN+ K+A G+ R + ++ AGKGKMR R
Sbjct: 161 VEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGR 216
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/55 (43%), Positives = 26/55 (47%)
Frame = +1
Query: 328 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSRCCYRVPALV 492
W VR C+R HV WW +VR E L LAP QP A L C RV V
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAV 186
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
AG +T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 53 AGKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 37.9 bits (84), Expect = 0.22
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +2
Query: 242 REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 394
R+ AG +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 254 AGHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
AG SA+S TG ARI R++GGG R G+ RGGR P K
Sbjct: 52 AGMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 36.3 bits (80), Expect = 0.69
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +2
Query: 251 GAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 379
GA H AE + T AR PR GGG HR GA G + RGG
Sbjct: 186 GAPH-AEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.91
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 138 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 224
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*APQGMX*YPLRXQVXR-LXAGKGKMRNR 674
+E +PE+ LVV D I KT +A G + + R + +GKGKMRNR
Sbjct: 147 VEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNR 202
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 35.9 bits (79), Expect = 0.91
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 289 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 453
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 454 GGSRCCYRVPA 486
G+ C PA
Sbjct: 139 HGAPSCLSTPA 149
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 242 REQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 382
RE G G A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 224 LEAALLREQGAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 346
L A+ R G G +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 374 HDTCYRRHPDRTYEYHHHGHAEFGRQH 294
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;
n=1; Janibacter sp. HTCC2649|Rep: Hypothetical short
chain dehydrogenase - Janibacter sp. HTCC2649
Length = 217
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 239 LREQGAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGG 379
+R+QG GH + SWG + + PRV G H ++CR G
Sbjct: 123 MRDQGFGHVVNVTSWGVQKKQPKFSPRVEVGARHMGPHRRARDLCRRG 170
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 33.9 bits (74), Expect = 3.7
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRN 671
I ++PEL LVV DKV+ KT++A + R+ AGKGKMRN
Sbjct: 7 IGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 383 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 270
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 359 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 264
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.5 bits (73), Expect = 4.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 386 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 270
TY+ H Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTH 149
>UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 366
Score = 33.1 bits (72), Expect = 6.4
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +2
Query: 149 APPVRVQGAH-PSGPGQ*CSRFYVQELEAALLREQ----GAGHQTSAESWGTGRAVARIP 313
APP V H GPG+ + V ++ R + G GHQ S + T A AR+
Sbjct: 68 APPASVWAVHVDGGPGERAALVLVDRVDDGGRRTELLAGGGGHQASLAAT-TPAAAARLG 126
Query: 314 RVRGGGTHRSG 346
+V G HR G
Sbjct: 127 QVLGEAAHRRG 137
>UniRef50_Q5TV94 Cluster: ENSANGP00000029021; n=2; cellular
organisms|Rep: ENSANGP00000029021 - Anopheles gambiae
str. PEST
Length = 1711
Score = 33.1 bits (72), Expect = 6.4
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 80 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGAG 259
S GS SVG E AG S ++ QG+ S G + + +++L G+G
Sbjct: 1489 SYGSQNISVGADDESQSTAGGSPNSTLKQQGSVESTSGLASGYVHKANVPSSMLSGGGSG 1548
Query: 260 HQTSAESWGTGRAV-ARIPRVRG 325
+ S G G A +RIP V G
Sbjct: 1549 FSAALASGGNGVAAGSRIPGVPG 1571
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 6.4
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 392 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 255
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_Q2CHG8 Cluster: Type I secretion target repeat protein; n=1;
Oceanicola granulosus HTCC2516|Rep: Type I secretion
target repeat protein - Oceanicola granulosus HTCC2516
Length = 11286
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -1
Query: 377 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLLAHAVGLPRVL 219
HH + H + H HGH G +H + H FG QLL +G VL
Sbjct: 10553 HHSDDHHHHHHGDDDDHGHGHGHHGHKHGSFDP-WHVFGLQLLEPGIGGDDVL 10604
>UniRef50_Q120B1 Cluster: Enoyl-CoA hydratase/isomerase; n=4;
Proteobacteria|Rep: Enoyl-CoA hydratase/isomerase -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 262
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 314 AEFGRQHVQYPMIQHWFGDQLLAHAVGLPRVL 219
A FG QH Q+ +I W G Q + VGL R L
Sbjct: 131 ARFGDQHAQFGLIPGWGGSQRMPRIVGLRRGL 162
>UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;
n=1; alpha proteobacterium HTCC2255|Rep: Probable fatty
acid desaturase protein - alpha proteobacterium HTCC2255
Length = 347
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 383 YVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLLAHAV 237
YV H H DR E+ H A G H P+I HWF + H V
Sbjct: 238 YVQHQF-EDTHWDREEEWDMHKAALEGSSHYDLPLILHWFSANIGIHHV 285
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 389 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQLL 249
R + HHD + +H R ++HHHGH GR+ H D+ L
Sbjct: 443 RDHHHHD--HHQHDRRLRDHHHHGHRLRGRRRRDRHRRDHHHHDRCL 487
Score = 32.7 bits (71), Expect = 8.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 389 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 297
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 32.7 bits (71), Expect = 8.4
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +2
Query: 71 RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQ 250
R ++G P VG R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG-GVGARRR--GGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 251 GAGHQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 388
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 32.7 bits (71), Expect = 8.4
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 415
+G S E+WG G AR+PR + G + GGR P KP R+W
Sbjct: 52 SGVDYSWENWGPGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKW 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,907,488
Number of Sequences: 1657284
Number of extensions: 12896504
Number of successful extensions: 40774
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 37614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40274
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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