Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060359.seq
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 127 4e-29
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 127 4e-29
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 127 4e-29
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 127 4e-29
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 125 2e-28
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 36 0.13
D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein. 30 8.7
BC090046-1|AAH90046.1| 666|Homo sapiens acyl-CoA synthetase bub... 30 8.7
BC022027-1|AAH22027.1| 666|Homo sapiens ACSBG2 protein protein. 30 8.7
AY358766-1|AAQ89126.1| 616|Homo sapiens PRTD-NY3 protein. 30 8.7
AY009107-1|AAG49398.1| 479|Homo sapiens PRTD-NY3 protein. 30 8.7
AK057412-1|BAB71476.1| 466|Homo sapiens protein ( Homo sapiens ... 30 8.7
AJ577571-5|CAE12157.1| 649|Homo sapiens bubblegum related prote... 30 8.7
AJ577571-4|CAE12156.1| 666|Homo sapiens bubblegum related prote... 30 8.7
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 31.9 bits (69), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV +GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 72 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 126
Score = 74.5 bits (175), Expect = 3e-13
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +3
Query: 78 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 70
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 158 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 213
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 147 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 194
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE++PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ P P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 125 bits (301), Expect = 2e-28
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 418
AGHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 58 AGHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 76.2 bits (179), Expect = 1e-13
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +3
Query: 81 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 251
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSE 56
Score = 39.1 bits (87), Expect = 0.014
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 IEKIPELXLVVPDKVQEINKTKQAASX*AP-QGMX*YPLRXQVXRLXAGKGKMRNR 674
IE+ PEL LVV DKV+ KTK+A + R+ AGKGKMRNR
Sbjct: 144 IEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 199
Score = 35.5 bits (78), Expect = 0.17
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 478 VPALVQARGHILKRFPSXPWLYPTKSKRSTRPNR-LHLXERLKAWXDI 618
+PALV ++GH ++ FP P + K + + + L ++LKAW DI
Sbjct: 133 LPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 35.9 bits (79), Expect = 0.13
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 289 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 453
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 454 GGSRCCYRVPA 486
G+ C PA
Sbjct: 139 HGAPSCLSTPA 149
>D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.
Length = 1696
Score = 29.9 bits (64), Expect = 8.7
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +1
Query: 385 VRPHEALAALAPSRQPPTAESGLGGSRCCYRVPALVQARGHILKRFP 525
+R H A AP T E L SRC P+ RGH K+ P
Sbjct: 1315 LRRHPEPAQPAPGSPAETTEGPLHCSRCGLLCPSPASLRGHTRKQHP 1361
>BC090046-1|AAH90046.1| 666|Homo sapiens acyl-CoA synthetase
bubblegum family member 2 protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 129 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 7
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
>BC022027-1|AAH22027.1| 666|Homo sapiens ACSBG2 protein protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 129 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 7
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
>AY358766-1|AAQ89126.1| 616|Homo sapiens PRTD-NY3 protein.
Length = 616
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 129 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 7
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 224 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 264
>AY009107-1|AAG49398.1| 479|Homo sapiens PRTD-NY3 protein.
Length = 479
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 129 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 7
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 87 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 127
>AK057412-1|BAB71476.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ32850 fis, clone TESTI2003419, moderately
similar to Homo sapiens very long-chain acyl-CoA
synthetase (BG1) ).
Length = 466
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 129 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 7
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 74 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 114
>AJ577571-5|CAE12157.1| 649|Homo sapiens bubblegum related protein
protein.
Length = 649
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 129 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 7
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 257 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 297
>AJ577571-4|CAE12156.1| 666|Homo sapiens bubblegum related protein
protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -3
Query: 129 SHSSLNTPTLKVGLPIDSFRYFSEAIPLKYTLIAVIKTIRP 7
SH + + V + I + YF++A LK TL++ +K ++P
Sbjct: 274 SHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKP 314
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,951,484
Number of Sequences: 237096
Number of extensions: 1998530
Number of successful extensions: 5240
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5150
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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