Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060358.seq
(603 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W1Y1 Cluster: UPF0172 protein CG3501; n=3; Sophophora... 90 4e-17
UniRef50_Q5TPN5 Cluster: ENSANGP00000027018; n=2; Culicidae|Rep:... 85 2e-15
UniRef50_UPI00015B54D6 Cluster: PREDICTED: similar to conserved ... 77 3e-13
UniRef50_UPI0000D55A29 Cluster: PREDICTED: similar to Hypothetic... 70 4e-11
UniRef50_Q4PCQ4 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_A7RMN9 Cluster: Predicted protein; n=1; Nematostella ve... 56 9e-07
UniRef50_O43402 Cluster: Neighbor of COX4; n=23; Deuterostomia|R... 52 8e-06
UniRef50_Q9Y3B6 Cluster: UPF0172 protein C14orf122; n=14; Eutele... 50 6e-05
UniRef50_Q8L439 Cluster: Chlorophyll antenna size regulatory pro... 48 2e-04
UniRef50_Q5D9I6 Cluster: SJCHGC01804 protein; n=2; Schistosoma j... 46 0.001
UniRef50_Q9FG71 Cluster: UPF0172 protein At5g55940; n=10; core e... 45 0.001
UniRef50_Q4SKU7 Cluster: Chromosome undetermined SCAF14565, whol... 45 0.002
UniRef50_Q7XWV6 Cluster: OSJNBb0067G11.11 protein; n=3; Oryza sa... 42 0.011
UniRef50_Q55FM0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_Q580G6 Cluster: Putative uncharacterized protein; n=2; ... 38 0.14
UniRef50_UPI00006CDDD8 Cluster: Mov34/MPN/PAD-1 family protein; ... 37 0.42
UniRef50_Q4QIR5 Cluster: Putative uncharacterized protein; n=3; ... 36 0.74
UniRef50_Q8IHW7 Cluster: Putative uncharacterized protein; n=4; ... 36 0.97
UniRef50_Q55PD7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.97
UniRef50_A0D917 Cluster: Chromosome undetermined scaffold_41, wh... 32 9.1
>UniRef50_Q9W1Y1 Cluster: UPF0172 protein CG3501; n=3;
Sophophora|Rep: UPF0172 protein CG3501 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 89.8 bits (213), Expect = 4e-17
Identities = 48/85 (56%), Positives = 58/85 (68%)
Frame = +2
Query: 263 AGKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENF 442
A KT +G + ++IVDAIPLFH YV+PMAEVAL I+ A+ E VIAGYYAA ENF
Sbjct: 32 AEKTSKGSQ---VEIVDAIPLFHQCLYVTPMAEVALMLIDAHAEREGLVIAGYYAAPENF 88
Query: 443 RDNIVERCPGLKIAEKIVEYFPLLC 517
DN V++ P KIA+KI E F C
Sbjct: 89 YDNQVDKTPAAKIADKIQENFKNAC 113
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRKVAGTKV*ISLMLYH 323
M + + AYAK+I HAAKYPH AVNG LL+ E+ K + ++ ++ L+H
Sbjct: 1 MCDYKVSERAYAKLIFHAAKYPHQAVNG--LLLAEKTSKGSQVEIVDAIPLFH 51
>UniRef50_Q5TPN5 Cluster: ENSANGP00000027018; n=2; Culicidae|Rep:
ENSANGP00000027018 - Anopheles gambiae str. PEST
Length = 198
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/74 (54%), Positives = 50/74 (67%)
Frame = +2
Query: 278 EGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIV 457
E G+ + I DA+PLFH +VSPMAEVAL Q+E A + + I GYY CENF DN
Sbjct: 34 ENGKTST--IADAVPLFHQCLHVSPMAEVALVQVEAKALQKGQHIVGYYVGCENFYDNRF 91
Query: 458 ERCPGLKIAEKIVE 499
ER PG++IA+KI E
Sbjct: 92 ERAPGIRIADKIAE 105
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 162 KMSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
KMSE+ + A+ KI+LHAAKYPH AVNG+LL
Sbjct: 1 KMSEIMFDPRAFCKIMLHAAKYPHLAVNGILL 32
>UniRef50_UPI00015B54D6 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 206
Score = 77.0 bits (181), Expect = 3e-13
Identities = 39/80 (48%), Positives = 49/80 (61%)
Frame = +2
Query: 266 GKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFR 445
GK + L IVDA+PLFH +VSPM+EVALT +E +A S+ VIAGYY A EN
Sbjct: 32 GKQPKSSSGTELQIVDAVPLFHVCLHVSPMSEVALTMVEQLASSQGLVIAGYYLANENIN 91
Query: 446 DNIVERCPGLKIAEKIVEYF 505
D ++ I+EKI E F
Sbjct: 92 DISTDKPAHRSISEKIAENF 111
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/55 (49%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRKVAGTKV*I--SLMLYH 323
M+++S AYAKIILHAAKYPHCA+NG LL+ ++ + +GT++ I ++ L+H
Sbjct: 1 MADISFSGRAYAKIILHAAKYPHCAING--LLLGKQPKSSSGTELQIVDAVPLFH 53
>UniRef50_UPI0000D55A29 Cluster: PREDICTED: similar to Hypothetical
UPF0172 protein CG3501; n=2; Endopterygota|Rep:
PREDICTED: similar to Hypothetical UPF0172 protein
CG3501 - Tribolium castaneum
Length = 202
Score = 70.1 bits (164), Expect = 4e-11
Identities = 33/77 (42%), Positives = 52/77 (67%)
Frame = +2
Query: 287 RNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERC 466
+++ ++ VDA+PLFH + +++PMAEVAL QI+ +A + VI+GYY A EN R+ E+
Sbjct: 38 KSKEIEFVDAVPLFHIALHLTPMAEVALMQIDELAAQKGLVISGYYTALENLRECSFEKA 97
Query: 467 PGLKIAEKIVEYFPLLC 517
+I+EK+ FP C
Sbjct: 98 -SHRISEKLPSNFPSPC 113
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
MS+++ AY KIILHAAKYPHC+VNGVLL
Sbjct: 1 MSDITFSAKAYCKIILHAAKYPHCSVNGVLL 31
>UniRef50_Q4PCQ4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 204
Score = 56.4 bits (130), Expect = 5e-07
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +2
Query: 278 EGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIV 457
E +QS+DIVD+IPL HH ++PMAEVAL + A S+N I G Y A E I
Sbjct: 36 ESTSSQSIDIVDSIPLSHHWTALAPMAEVALALASSYASSKNLAIVGLYEAPE----LIA 91
Query: 458 ERCPGL---KIAEKI 493
ER P K+AEKI
Sbjct: 92 ERDPSAQASKLAEKI 106
>UniRef50_A7RMN9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 199
Score = 55.6 bits (128), Expect = 9e-07
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = +2
Query: 299 LDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLK 478
L ++DA+PLFHH ++P+ EVALTQ+++ ++ I GYY A E+ +N + K
Sbjct: 40 LYVLDAVPLFHHCLGLAPLLEVALTQVDSYCKTLGHHIIGYYQANEHIENNSPDNI-AYK 98
Query: 479 IAEKIVE 499
I EKI +
Sbjct: 99 IGEKIAD 105
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 180 IETGAYAKIILHAAKYPHCAVNGVLL 257
I AYAK++LHA+KYPH AVNGVLL
Sbjct: 5 ISARAYAKMLLHASKYPHKAVNGVLL 30
>UniRef50_O43402 Cluster: Neighbor of COX4; n=23; Deuterostomia|Rep:
Neighbor of COX4 - Homo sapiens (Human)
Length = 210
Score = 52.4 bits (120), Expect = 8e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 487
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 488 KIVEYF 505
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>UniRef50_Q9Y3B6 Cluster: UPF0172 protein C14orf122; n=14;
Euteleostomi|Rep: UPF0172 protein C14orf122 - Homo
sapiens (Human)
Length = 208
Score = 49.6 bits (113), Expect = 6e-05
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 QSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG 472
+ L + D +PLFH +S M EVAL Q++ V+AGYY A N N ++ PG
Sbjct: 39 ECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPG 94
Query: 473 ---LKIAEKIVEYFP 508
LKIA +I E+FP
Sbjct: 95 PLALKIAGRIAEFFP 109
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
M EV I AY K+ LHAA+YPH AVNG+ L
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFL 31
>UniRef50_Q8L439 Cluster: Chlorophyll antenna size regulatory
protein; n=2; Chlamydomonadaceae|Rep: Chlorophyll
antenna size regulatory protein - Chlamydomonas
reinhardtii
Length = 213
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 266 GKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRV-IAGYYAACENF 442
G KEGG S++I+DAIPL H + ++P E+ L Q+E+ V I GYY + F
Sbjct: 33 GTAKEGG---SVEILDAIPLCHTTLTLAPALEIGLAQVESYTHITGSVAIVGYYQSDARF 89
Query: 443 RDNIVERCPGLKIAEKIVEY 502
+ G KIA+K+ E+
Sbjct: 90 GPGDLPPL-GRKIADKVSEH 108
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 177 SIETGAYAKIILHAAKYPHCAVNGVLL 257
S + A KI+ HAAKYP +VNGVL+
Sbjct: 6 SADQTALLKILAHAAKYPSNSVNGVLV 32
>UniRef50_Q5D9I6 Cluster: SJCHGC01804 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01804 protein - Schistosoma
japonicum (Blood fluke)
Length = 122
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 305 IVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIA 484
I D IPLFH ++PM E AL +++ ++ I GY+ A E+ ++ LKI
Sbjct: 43 ITDYIPLFHSVLNLTPMLETALYHVDSYCTAKGLRICGYFQANEHVNSSMPTNI-ALKIG 101
Query: 485 EKIVEYFPLLCXL 523
EK+ E +C L
Sbjct: 102 EKLAEKCGAICIL 114
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 174 VSIETGAYAKIILHAAKYPHCAVNGVLL 257
V I + K+ILHAAK+P C+VNG+LL
Sbjct: 5 VHISELPFLKMILHAAKHPECSVNGLLL 32
>UniRef50_Q9FG71 Cluster: UPF0172 protein At5g55940; n=10; core
eudicotyledons|Rep: UPF0172 protein At5g55940 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 208
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 299 LDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLK 478
++I D++PLFH + + P E++L IE ++ I GY+ A E F D VE C K
Sbjct: 49 VEISDSVPLFHSNLALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDD--VELCGVAK 106
Query: 479 -IAEKIVEYFP 508
I + I YFP
Sbjct: 107 NIGDHISRYFP 117
>UniRef50_Q4SKU7 Cluster: Chromosome undetermined SCAF14565, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14565, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 204
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 GGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVE 460
G + ++ + D +PL H ++P+ ++ALTQ++ + I GYY A D+
Sbjct: 34 GPADGAVYVTDCVPLLHSHLPLAPITQLALTQVDVWCSQTQQRIVGYYQANACVSDS--S 91
Query: 461 RCPG-LKIAEKIVEYF 505
PG LKIA+KI E F
Sbjct: 92 PTPGALKIADKISEQF 107
Score = 36.3 bits (80), Expect = 0.56
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
M E+ + AY K+ LH +P C++NG+LL
Sbjct: 1 MGEMELSCRAYVKMYLHCCLFPRCSINGLLL 31
>UniRef50_Q7XWV6 Cluster: OSJNBb0067G11.11 protein; n=3; Oryza
sativa|Rep: OSJNBb0067G11.11 protein - Oryza sativa
subsp. japonica (Rice)
Length = 209
Score = 41.9 bits (94), Expect = 0.011
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +2
Query: 299 LDIVDAIPLFHHSHYVS--PMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG 472
+ I DA+PL HH H++ P E+ALT +E ++ + GYY A N R + + P
Sbjct: 48 VSIADAVPLSHHPHHLPLLPTLELALTLVEDHFAAQGLAVVGYYHA--NARRDDADLPPV 105
Query: 473 LK-IAEKIVEYFPLLCXLWWVTKK 541
K + + + FP L KK
Sbjct: 106 AKRVGDHVFRNFPRAAVLLLDNKK 129
Score = 32.3 bits (70), Expect = 9.1
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 192 AYAKIILHAAKYPHCAVNGVLL 257
AY K+ LHA K+P AVNG+L+
Sbjct: 13 AYVKLALHALKHPAAAVNGLLV 34
>UniRef50_Q55FM0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 192
Score = 41.9 bits (94), Expect = 0.011
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +2
Query: 296 SLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGL 475
S+ I D IPLFH + + PM EVA+ QIE + N + GYY + + + +
Sbjct: 39 SILITDIIPLFH-TQTLLPMFEVAMIQIEKYCRDNNIDMVGYYHSNQCIANELEPEPIAK 97
Query: 476 KIAEKIVEYFPLLCXL 523
KIA+++ +C L
Sbjct: 98 KIADRLNNELNNMCFL 113
>UniRef50_Q580G6 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 272
Score = 38.3 bits (85), Expect = 0.14
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 305 IVDAIPLFHHSHYVS--PMAEVALTQIETIAQSENRVIAGYYAACENFRDNIV 457
+ DA+PLFH PM VA Q+ + A+++ V+ GYY A E D V
Sbjct: 107 VADAVPLFHTIIMTDPHPMMTVAYAQVSSYARTKGLVLLGYYIANERTGDTAV 159
>UniRef50_UPI00006CDDD8 Cluster: Mov34/MPN/PAD-1 family protein;
n=1; Tetrahymena thermophila SB210|Rep: Mov34/MPN/PAD-1
family protein - Tetrahymena thermophila SB210
Length = 205
Score = 36.7 bits (81), Expect = 0.42
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 290 NQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAA 430
N + + DA PLFH S VSP E A IE + + ++I G Y A
Sbjct: 40 NGQITVEDAYPLFH-SRVVSPTLETAFELIEGALKKKKQIIVGLYEA 85
>UniRef50_Q4QIR5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 254
Score = 35.9 bits (79), Expect = 0.74
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 281 GGRNQSLDIVDAIPLFHHSHYVSP--MAEVALTQIETIAQSENRVIAGYYAACENFRDN 451
G + + + DA+PLFH +P M EVA ++ A++ + + G Y A E DN
Sbjct: 65 GTSSSTYYVSDAVPLFHTLPMTAPHPMLEVAYAHVQYAAKTTGQSLLGVYIANERLTDN 123
>UniRef50_Q8IHW7 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 198
Score = 35.5 bits (78), Expect = 0.97
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 162 KMSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
K +E++I+ GAYAKI +H+ KY V G+L+
Sbjct: 2 KYTEITIDDGAYAKIFMHSIKYSCDDVCGILI 33
Score = 34.7 bits (76), Expect = 1.7
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 236 CCEWCAFADAGKTKEGGRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIA 415
C + C + + I + IPLFH +H +SP +A T +E + ++ I
Sbjct: 25 CDDVCGILIGKYLSSNEKKKKCLITNYIPLFH-THILSPYLNLAFTLVENYYKDKDERII 83
Query: 416 GYY-AACENFRDNIVERCPGLK-IAEKIVEYF 505
GY+ + ++ +++ +E + I+EK+++ +
Sbjct: 84 GYFHISSDDSKNSDIENIKVCELISEKLIKNY 115
>UniRef50_Q55PD7 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 190
Score = 35.5 bits (78), Expect = 0.97
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 311 DAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAA 430
DA+P+ HH +SPM E L+ + A+ ++ I G Y A
Sbjct: 47 DAVPILHHYTSLSPMMEAGLSIVGKYAEINHKRIVGVYVA 86
>UniRef50_A0D917 Cluster: Chromosome undetermined scaffold_41, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_41,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 184
Score = 32.3 bits (70), Expect = 9.1
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +2
Query: 290 NQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFR 445
+++++IVDA PLFH ++ + EV+L I + Q++ ++I G Y A N R
Sbjct: 42 DKNINIVDAYPLFHSRVSLNTL-EVSLDIISSELQNDRKII-GVYEAKANSR 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,059,964
Number of Sequences: 1657284
Number of extensions: 8960129
Number of successful extensions: 20343
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 19910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20339
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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