Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060358.seq
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 52 1e-06
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 52 1e-06
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 52 1e-06
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 52 1e-06
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 52 1e-06
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 52 1e-06
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 52 2e-06
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 50 5e-06
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 50 6e-06
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 50 8e-06
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 487
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 488 KIVEYF 505
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 487
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 488 KIVEYF 505
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 487
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 488 KIVEYF 505
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 487
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 488 KIVEYF 505
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 487
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 488 KIVEYF 505
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPGLKIAE 487
VD IPLFH + ++PM EVALT I++ + + VIAGYY A E +D + K+A
Sbjct: 55 VDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQV-AEKVAS 113
Query: 488 KIVEYF 505
+I E F
Sbjct: 114 RIAEGF 119
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 51.6 bits (118), Expect = 2e-06
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 284 GRNQSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVER 463
G + L + D +PLFH +S M EVAL Q++ V+AGYY A N N ++
Sbjct: 36 GSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQ 91
Query: 464 CPG---LKIAEKIVEYFP 508
PG LKIA +I E+FP
Sbjct: 92 SPGPLALKIAGRIAEFFP 109
Score = 42.3 bits (95), Expect = 0.001
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
M EV I Y K+ LHAA+YPH AVNG+ L
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFL 31
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLLMPERLRK 281
M V + T AY K++LH AKYPHCAVNG+L+ ++ RK
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRK 39
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 308 VDAIPLFHHSHYVSPMAEVALT 373
VD IPLFH + ++PM EVALT
Sbjct: 55 VDCIPLFHGTLALAPMLEVALT 76
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 50.0 bits (114), Expect = 6e-06
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 QSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG 472
+ L + D +PLFH +S M EVAL Q++ V+AGYY A N N ++ PG
Sbjct: 39 EGLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPG 94
Query: 473 ---LKIAEKIVEYFP 508
LKIA +I E+FP
Sbjct: 95 PLALKIAGRIAEFFP 109
Score = 44.0 bits (99), Expect = 4e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
M EV I AY K+ LHAA+YPH AVNG+ L
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFL 31
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 49.6 bits (113), Expect = 8e-06
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 QSLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAGYYAACENFRDNIVERCPG 472
+ L + D +PLFH +S M EVAL Q++ V+AGYY A N N ++ PG
Sbjct: 39 ECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHA--NAAVN--DQSPG 94
Query: 473 ---LKIAEKIVEYFP 508
LKIA +I E+FP
Sbjct: 95 PLALKIAGRIAEFFP 109
Score = 44.0 bits (99), Expect = 4e-04
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 165 MSEVSIETGAYAKIILHAAKYPHCAVNGVLL 257
M EV I AY K+ LHAA+YPH AVNG+ L
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFL 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,856,244
Number of Sequences: 237096
Number of extensions: 1510303
Number of successful extensions: 5764
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5761
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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