Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060357.seq
         (466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   4.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    20   9.8  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 322 TGCTQLSQSIGTPGGRTLCRDG 257
           T  T  S S   PGGRTL   G
Sbjct: 6   TQSTSPSASEAFPGGRTLVEKG 27


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 260 WTTVY*HYPLHQMRWCHHQAAG 195
           W TVY H P  Q+     Q  G
Sbjct: 528 WQTVYNHRPWQQLHLNKKQILG 549


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = +1

Query: 265 YIVFFHLVFRCSAII-----VYILCGWF 333
           Y  + HL+F C+ II     +++LC ++
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 371 RMTNSKLAMNESENHPHRMYTIIAEH 294
           +  N+  A N   +H H  + I A+H
Sbjct: 309 QQNNNNAATNNQNHHHHAGHHIHAQH 334


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 265 YIVFFHLVFRCSAIIVYIL 321
           Y+ FFHL      ++VY+L
Sbjct: 275 YVFFFHLSDVRYVMVVYLL 293


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 293 RNTRWKNTM*GWTTVY*HYPLHQM 222
           +N R KNT       Y HY L+Q+
Sbjct: 131 KNARVKNTALWKQLRYEHYRLYQL 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,470
Number of Sequences: 336
Number of extensions: 2137
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)