Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060357.seq
(466 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence si... 71 3e-12
AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein. 67 2e-11
AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein. 67 2e-11
BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence si... 64 3e-10
AB074181-1|BAE45741.1| 164|Homo sapiens putative protein produc... 64 3e-10
BC053635-1|AAH53635.1| 857|Homo sapiens nucleolar protein 14 pr... 31 2.0
BC026035-1|AAH26035.1| 806|Homo sapiens NOL14 protein protein. 31 2.0
AF040965-1|AAB97011.1| 873|Homo sapiens unknown protein IT12 pr... 31 2.0
AB000467-1|BAA19121.1| 718|Homo sapiens protein ( Homo sapiens ... 31 2.0
>BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence
similarity 18, member B protein.
Length = 205
Score = 70.5 bits (165), Expect = 3e-12
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = +1
Query: 259 HPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFELVILXLSAXFWTVKNISGXVL 423
HP FFHL FR SAIIVY+LCG S SFI +IL LS FW VKN++G ++
Sbjct: 33 HPVASFFHLFFRVSAIIVYLLCGLLSSSFITCMVTIILLLSCDFWAVKNVTGRLM 87
>AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein.
Length = 205
Score = 67.3 bits (157), Expect = 2e-11
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +1
Query: 259 HPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFELVILXLSAXFWTVKNISGXVL 423
HP FFHL FR SAIIVY+LC S SFI +IL LS FW VKN++G ++
Sbjct: 33 HPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLM 87
>AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein.
Length = 181
Score = 67.3 bits (157), Expect = 2e-11
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +1
Query: 259 HPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFELVILXLSAXFWTVKNISGXVL 423
HP FFHL FR SAIIVY+LC S SFI +IL LS FW VKN++G ++
Sbjct: 33 HPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLM 87
>BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence
similarity 18, member B2 protein.
Length = 276
Score = 63.7 bits (148), Expect = 3e-10
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +1
Query: 259 HPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFELVILXLSAXFWTVKNISGXVL 423
HP FFHL FR SAIIV +LC S SFI +IL LS FW VKN++G ++
Sbjct: 33 HPVASFFHLFFRVSAIIVCLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLM 87
>AB074181-1|BAE45741.1| 164|Homo sapiens putative protein product
of Nbla10383 protein.
Length = 164
Score = 63.7 bits (148), Expect = 3e-10
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +1
Query: 259 HPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFELVILXLSAXFWTVKNISGXVL 423
HP FFHL FR SAIIV +LC S SFI +IL LS FW VKN++G ++
Sbjct: 33 HPVASFFHLFFRVSAIIVCLLCELLSSSFITCMVTIILLLSCDFWAVKNVTGRLM 87
>BC053635-1|AAH53635.1| 857|Homo sapiens nucleolar protein 14
protein.
Length = 857
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 192 RSRCLMMTPSHLVKRIMLINSCPSLHSVLPPGVPMLCD---NCVHPVWVVLRLIHCKLRI 362
R CL + + L + +++ S PS H+++ P +L D +C HP + +
Sbjct: 684 RLSCLAVGLALLKRCVLMYGSLPSFHAIMGPLQALLTDHLADCSHPQELQELCQSTLTEM 743
Query: 363 SHSTAVCRXLDCQE 404
+CR L C++
Sbjct: 744 ESQKQLCRPLTCEK 757
>BC026035-1|AAH26035.1| 806|Homo sapiens NOL14 protein protein.
Length = 806
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 192 RSRCLMMTPSHLVKRIMLINSCPSLHSVLPPGVPMLCD---NCVHPVWVVLRLIHCKLRI 362
R CL + + L + +++ S PS H+++ P +L D +C HP + +
Sbjct: 684 RLSCLAVGLALLKRCVLMYGSLPSFHAIMGPLQALLTDHLADCSHPQELQELCQSTLTEM 743
Query: 363 SHSTAVCRXLDCQE 404
+CR L C++
Sbjct: 744 ESQKQLCRPLTCEK 757
>AF040965-1|AAB97011.1| 873|Homo sapiens unknown protein IT12
protein.
Length = 873
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 192 RSRCLMMTPSHLVKRIMLINSCPSLHSVLPPGVPMLCD---NCVHPVWVVLRLIHCKLRI 362
R CL + + L + +++ S PS H+++ P +L D +C HP + +
Sbjct: 700 RLSCLAVGLALLKRCVLMYGSLPSFHAIMGPLQALLTDHLADCSHPQELQELCQSTLTEM 759
Query: 363 SHSTAVCRXLDCQE 404
+CR L C++
Sbjct: 760 ESQKQLCRPLTCEK 773
>AB000467-1|BAA19121.1| 718|Homo sapiens protein ( Homo sapiens
mRNA, partial cds, clone:RES4-25. ).
Length = 718
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 192 RSRCLMMTPSHLVKRIMLINSCPSLHSVLPPGVPMLCD---NCVHPVWVVLRLIHCKLRI 362
R CL + + L + +++ S PS H+++ P +L D +C HP + +
Sbjct: 545 RLSCLAVGLALLKRCVLMYGSLPSFHAIMGPLQALLTDHLADCSHPQELQELCQSTLTEM 604
Query: 363 SHSTAVCRXLDCQE 404
+CR L C++
Sbjct: 605 ESQKQLCRPLTCEK 618
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,261,689
Number of Sequences: 237096
Number of extensions: 1246393
Number of successful extensions: 1974
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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