Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060355.seq
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.9  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   6.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -3

Query: 338  MEIDWRTPPCGGFQGSRGPGVPSLELPQFV 249
            +++DW  P C     ++GP         FV
Sbjct: 1940 LDLDWEYPKCWQVDCNKGPASDKSAFADFV 1969



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 338  MEIDWRTPPCGGFQGSRGP 282
            +++DW  P C     ++GP
Sbjct: 2438 LDLDWEYPKCWQVDCNKGP 2456



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -3

Query: 338  MEIDWRTPPCGGFQGSRGP 282
            +++DW  P C      +GP
Sbjct: 1515 LDLDWEYPKCWQVDCKKGP 1533


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 393 NMTRNMTRLYFRPPLPKDSVSDPPSF 470
           N+T +     +R P P+   S PP +
Sbjct: 31  NLTTSKLLYTYRQPYPRQKKSHPPQW 56


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 241 AATTNCGSSNDGTPG 285
           AA  + G++N+GTPG
Sbjct: 182 AAQVSGGNNNNGTPG 196


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 177 GERKEYRNGEDDGFLEDDECQVSGWLR 97
           G+     N EDD   E  + Q+  W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 177 GERKEYRNGEDDGFLEDDECQVSGWLR 97
           G+     N EDD   E  + Q+  W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 640 RLESCWKSCEVLIEIDTFNEKVGLKRNFM 554
           RLE+ W++       DT  + +G+  +F+
Sbjct: 7   RLENTWRAFTASWSPDTLAKNLGINSSFV 35


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 177 GERKEYRNGEDDGFLEDDECQVSGWLR 97
           G+     N EDD   E  + Q+  W+R
Sbjct: 189 GQGSSTNNDEDDDDEETGDRQIYPWMR 215


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 281 RDPDSLEIRHKGEF 322
           +DP+SL I  KG+F
Sbjct: 307 QDPESLLINGKGQF 320


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 281 RDPDSLEIRHKGEF 322
           +DP+SL I  KG+F
Sbjct: 307 QDPESLLINGKGQF 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,559
Number of Sequences: 336
Number of extensions: 4028
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)