Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060355.seq
(667 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF090139-1|AAC35985.1| 105|Homo sapiens immunoglobulin heavy ch... 35 0.23
AF090138-1|AAC35984.1| 105|Homo sapiens immunoglobulin heavy ch... 33 1.2
BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein. 32 1.6
AJ627972-1|CAF31318.1| 119|Homo sapiens immunoglobulin heavy ch... 32 2.1
AJ627967-1|CAF31313.1| 119|Homo sapiens immunoglobulin heavy ch... 32 2.1
AJ627960-1|CAF31306.1| 119|Homo sapiens immunoglobulin heavy ch... 32 2.1
EF544932-1|ABQ23121.1| 126|Homo sapiens immunoglobulin heavy ch... 31 3.7
AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens ... 31 3.7
AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like ... 31 3.7
AF262120-1|AAF80011.1| 132|Homo sapiens immunoglobulin heavy ch... 31 3.7
EF178136-1|ABM67291.1| 124|Homo sapiens immunoglobulin heavy ch... 30 8.5
AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens ... 30 8.5
AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein. 30 8.5
AJ130895-1|CAA10236.1| 111|Homo sapiens immunoglobulin heavy ch... 30 8.5
AF107241-1|AAF14206.1| 128|Homo sapiens immunoglobulin heavy ch... 30 8.5
>AF090139-1|AAC35985.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 35.1 bits (77), Expect = 0.23
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLE-IRHKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYD 412
+++LQ A +++P + SL + H G FSN F W+ P G + + I P + Y+
Sbjct: 1 QVQLQQWGAGLLKPSETLSLTCVVHGGSFSNYFWSWIRQPPGKGLEWIGEINPSGRTDYN 60
Query: 413 PTLLS 427
P+L S
Sbjct: 61 PSLKS 65
>AF090138-1|AAC35984.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLE-IRHKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYD 412
+++L+ ++ +P + SL + H G FSN F W+ P G + + I P + Y+
Sbjct: 1 QVQLRESGPVLAKPSETLSLTCVVHGGSFSNYFWSWIRQPPGKGLEWIGEINPSGRTDYN 60
Query: 413 PTLLS 427
P+L S
Sbjct: 61 PSLKS 65
>BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 297 LKSATRGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDPPSFLT 476
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 72 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASSCPPSIT 131
Query: 477 DFLL 488
+ ++
Sbjct: 132 NSMV 135
>AJ627972-1|CAF31318.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLEIR-HKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYD 412
+++LQ A +++P + SL + G FS+ + W+ P G + + I P + YD
Sbjct: 1 QVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINPSGSTNYD 60
Query: 413 PTLLS 427
P+L S
Sbjct: 61 PSLKS 65
>AJ627967-1|CAF31313.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLEIR-HKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYD 412
+++LQ A +++P + SL + G FS+ + W+ P G + + I P + YD
Sbjct: 1 QVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINPSGSTNYD 60
Query: 413 PTLLS 427
P+L S
Sbjct: 61 PSLKS 65
>AJ627960-1|CAF31306.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLEIR-HKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYD 412
+++LQ A +++P + SL + G FS+ + W+ P G + + I P + YD
Sbjct: 1 QVQLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINPSGSTNYD 60
Query: 413 PTLLS 427
P+L S
Sbjct: 61 PSLKS 65
>EF544932-1|ABQ23121.1| 126|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 126
Score = 31.1 bits (67), Expect = 3.7
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLEIR-HKGEFSN-QFPWVDLPYENGAQTLSVIAPKHDSKYD 412
+++LQ A +++P + SL + G FS + W+ P G + + I P + Y+
Sbjct: 1 QVQLQQWGARLLKPSETLSLSCGVYGGSFSGYSWTWIRQPPGKGLEWIGEINPSGTTNYN 60
Query: 413 PTLLS 427
P+L+S
Sbjct: 61 PSLMS 65
>AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ14950 fis, clone PLACE2000371, weakly similar to
TENSIN. ).
Length = 480
Score = 31.1 bits (67), Expect = 3.7
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 297 LKSATRGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDPPSFLT 476
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 72 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASICPPSIT 131
Query: 477 DFLL 488
+ ++
Sbjct: 132 NSMV 135
>AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like
protein protein.
Length = 715
Score = 31.1 bits (67), Expect = 3.7
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 297 LKSATRGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDPPSFLT 476
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 307 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASICPPSIT 366
Query: 477 DFLL 488
+ ++
Sbjct: 367 NSMV 370
>AF262120-1|AAF80011.1| 132|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 132
Score = 31.1 bits (67), Expect = 3.7
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLEIR-HKGEFSN-QFPWVDLPYENGAQTLSVIAPKHDSKYD 412
+++LQ A +++P + SL + G FS + W+ P G + + I P + Y+
Sbjct: 1 QVQLQQWGARLLKPSETLSLSCGVYGGSFSGYSWTWIRQPPGKGLEWIGEINPSGTTNYN 60
Query: 413 PTLLS 427
P+L+S
Sbjct: 61 PSLMS 65
>EF178136-1|ABM67291.1| 124|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 124
Score = 29.9 bits (64), Expect = 8.5
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 233 LSRLRLQTVAALMMEPRDPDSLEIR-HKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSK 406
+++++LQ A +++P + SL + G FS + W+ P G + + I+ + +
Sbjct: 1 MAQVQLQESGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEISQRGSTN 60
Query: 407 YDPTLLS 427
Y+P+L S
Sbjct: 61 YNPSLKS 67
>AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens
cDNA FLJ39559 fis, clone SKMUS2000701, weakly similar to
VESTIGIAL PROTEIN. ).
Length = 317
Score = 29.9 bits (64), Expect = 8.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 350 PYENGAQTLSVIAPKHDSKYDPTLLSASIAKRLRFRPSFLPYRLSPSDEVLG 505
PY A V AP D +Y P L+ A+ + R + P SP E+ G
Sbjct: 220 PYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSG 271
>AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein.
Length = 317
Score = 29.9 bits (64), Expect = 8.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 350 PYENGAQTLSVIAPKHDSKYDPTLLSASIAKRLRFRPSFLPYRLSPSDEVLG 505
PY A V AP D +Y P L+ A+ + R + P SP E+ G
Sbjct: 220 PYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSG 271
>AJ130895-1|CAA10236.1| 111|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 111
Score = 29.9 bits (64), Expect = 8.5
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 233 LSRLRLQTVAALMMEPRDPDSLEIR-HKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSK 406
LS+++LQ A +++P + SL + G FS + W+ E G + + I+ ++
Sbjct: 2 LSQVKLQQWGAGLLKPSETLSLTCAVYGGSFSAHYWSWIRQSPEKGLEWIGEISHTGNTN 61
Query: 407 YDPTLLS 427
Y+P+L S
Sbjct: 62 YNPSLKS 68
>AF107241-1|AAF14206.1| 128|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 128
Score = 29.9 bits (64), Expect = 8.5
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 RLRLQTVAALMMEPRDPDSLEIR-HKGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYD 412
++RLQ A +++P + SL + G FS+ + W+ P G + + I +KY+
Sbjct: 1 QVRLQQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTKYN 60
Query: 413 PTLLS 427
P+L S
Sbjct: 61 PSLKS 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,382,253
Number of Sequences: 237096
Number of extensions: 2619750
Number of successful extensions: 6630
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6630
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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