Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060355.seq
         (667 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g35240.1 68415.m04323 plastid developmental protein DAG, puta...    34   0.098
At1g32580.1 68414.m04020 plastid developmental protein DAG, puta...    30   1.6  
At2g33430.1 68415.m04097 plastid developmental protein DAG, puta...    29   2.1  
At3g07160.1 68416.m00853 glycosyl transferase family 48 protein ...    29   3.7  
At1g51190.1 68414.m05758 ovule development protein, putative sim...    29   3.7  
At3g22790.1 68416.m02873 kinase interacting family protein simil...    28   4.9  
At3g50580.1 68416.m05532 proline-rich family protein contains pr...    28   6.4  
At3g44730.1 68416.m04814 kinesin motor protein-related similar t...    28   6.4  
At5g61520.1 68418.m07719 hexose transporter, putative similar to...    27   8.5  
At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)           27   8.5  
At1g70260.1 68414.m08083 nodulin MtN21 family protein contains s...    27   8.5  

>At2g35240.1 68415.m04323 plastid developmental protein DAG,
           putative similar to plastid protein [Arabidopsis
           thaliana] gi|2246378|emb|CAB06698
          Length = 232

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 28/87 (32%), Positives = 39/87 (44%)
 Frame = +3

Query: 24  SAKPLPANDTSDIIIFAPELFDLQSSAIPRLDTHHLPETRRPLHFDIPSSLPTKVDISSV 203
           S  PLP++  S    F+P +F      IP L       TR        S L +  + S  
Sbjct: 26  SPSPLPSHLISRR--FSPTIFHAVGY-IPALTRFTTIRTRMDRSGGSYSPLKSGSNFSDR 82

Query: 204 EPTDTAIEPVYPGCDYKLWQL**WNPG 284
            PT+ A  P++PGCDY+ W +    PG
Sbjct: 83  PPTEMA--PLFPGCDYEHWLIVMEKPG 107


>At1g32580.1 68414.m04020 plastid developmental protein DAG,
           putative similar to DAG protein, chloroplast precursor
           [Garden snapdragon] SWISS-PROT:Q38732
          Length = 229

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 168 SSLPTKVDISSVEPTDTAIEPVYPGCDYKLWQL**WNPG 284
           S L +  + S   PT+ A  P++PGCDY+ W +    PG
Sbjct: 68  SPLKSGSNFSDRAPTEMA--PLFPGCDYEHWLIVMDKPG 104


>At2g33430.1 68415.m04097 plastid developmental protein DAG,
           putative similar to DAG protein, chloroplast precursor
           [Garden snapdragon] SWISS-PROT:Q38732
          Length = 219

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 168 SSLPTKVDISSVEPTDTAIEPVYPGCDYKLWQL**WNPG 284
           S L +  + S   PT+ A  P++PGCDY+ W +    PG
Sbjct: 59  SPLNSGSNFSDRPPTEMA--PLFPGCDYEHWLIVMDKPG 95


>At3g07160.1 68416.m00853 glycosyl transferase family 48 protein
           similar to glucan synthase GB:AAD11794 [Filobasidiella
           neoformans var. neoformans]
          Length = 1931

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +3

Query: 33  PLPANDTSDIIIFAPELFDLQSSAIPRLDTH-HLPETRRPLHFDIPSSLPTKVDISSVEP 209
           P+PA  T+D++ F   +F  Q  ++     H  L         +IP     K+D ++V  
Sbjct: 242 PIPATRTADMLDFLHYIFGFQKDSVSNQREHIVLLLANEQSRLNIPEETEPKLDDAAVRK 301

Query: 210 TD-TAIEPVYPGCDY 251
               ++E     CDY
Sbjct: 302 VFLKSLENYIKWCDY 316


>At1g51190.1 68414.m05758 ovule development protein, putative
           similar to ovule development protein AINTEGUMENTA
           (GI:1209099) [Arabidopsis thaliana]
          Length = 568

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 325 GELPLVADFKGVGVPGFHH 269
           GE+P VADF GV   G HH
Sbjct: 61  GEVPKVADFLGVSKSGDHH 79


>At3g22790.1 68416.m02873 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) [Petunia
            integrifolia]
          Length = 1694

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 563  ELYDWDVVL*ARHRDEXRMCQGLRQKEKVCKEGRRV-GN 450
            EL + + +L A H     +C+ + +  K CKE R++ GN
Sbjct: 1168 ELLEAEEMLKATHNANAELCEAVEELRKDCKESRKLKGN 1206


>At3g50580.1 68416.m05532 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 265

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 276 NPGTPTPLKSATRGS-SPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSV 452
           +P  PTP KS +  S +P   H +       P   +L  P   ++ +     PP PK S 
Sbjct: 98  SPPPPTPKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSP 157

Query: 453 SDPPS 467
             PPS
Sbjct: 158 PPPPS 162


>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
           other kinesin-like proteins of A. thaliana: F02P16.12
           (PID:g2191180), katA (D11371), katB (D21137), and katC
           (D21138); contains non-consensus AT-AC splice sites at
           intron 10
          Length = 1087

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 412 PDFTFGLHCQKTPFPTLLPSLQTFS 486
           PD T  L   +TPFP  +P +++FS
Sbjct: 848 PDVTQNLPVSRTPFPARVPVVKSFS 872


>At5g61520.1 68418.m07719 hexose transporter, putative similar to
           hexose carrier protein hex6 {Ricinus communis}
           SP|Q07423; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 514

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 242 AGIDRFYGGVCRFNTTNVHFGRERGRNIEMERTTGFWK 129
           AGI  FYGG     T  V       +N+ +E+  G W+
Sbjct: 455 AGIFFFYGGWLVVMTVAVQLFLPETKNVPIEKVVGLWE 492


>At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)
          Length = 638

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 276 NPGTPTPLKSATRGSSPINFHGSISLMRMAPKPS--AL*HPNMTRNMT 413
           NP  P    S +  +SP + H S +L  + P PS     H N T +M+
Sbjct: 145 NPPPPQQPPSPSSTTSPRSHHNSSTLHMLLPSPSTNTTHHQNYTNHMS 192


>At1g70260.1 68414.m08083 nodulin MtN21 family protein contains
           similarity to MtN21 [Medicago truncatula] GI:2598575;
           contains Pfam profile PF00892: Integral membrane protein
          Length = 375

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/29 (37%), Positives = 22/29 (75%)
 Frame = -1

Query: 97  DWRSKSSGAKIIMSEVSLAGSGLADVERG 11
           DWR+ S+ AK++ + VSL+G+ + ++ +G
Sbjct: 132 DWRNTSTRAKLMGTIVSLSGAFVEELYKG 160


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,739,181
Number of Sequences: 28952
Number of extensions: 393103
Number of successful extensions: 1086
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)