Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060354.seq
(685 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 98 2e-22
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 98 2e-22
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 98 2e-22
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 98 3e-22
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 9.0
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 98.3 bits (234), Expect = 2e-22
Identities = 48/108 (44%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +2
Query: 245 KXXMQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 86 KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145
Query: 425 LASFISTAEQLQVKGLTGNQNEESSTPSNQSRLRGQ--APGRHNKDNL 562
L +F+ TAE L+V+GLT + + S ++ S+LR + R +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSADTD-SKLRSERIRDSRDERDSL 192
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 139 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 246
D+Q+ L WNN +N++ LL L DVTLA E
Sbjct: 50 DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACE 85
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 98.3 bits (234), Expect = 2e-22
Identities = 48/108 (44%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +2
Query: 245 KXXMQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 86 KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145
Query: 425 LASFISTAEQLQVKGLTGNQNEESSTPSNQSRLRGQ--APGRHNKDNL 562
L +F+ TAE L+V+GLT + + S ++ S+LR + R +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSADTD-SKLRSERIRDSRDERDSL 192
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 139 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 246
D+Q+ L WNN +N++ LL L DVTLA E
Sbjct: 50 DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACE 85
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 98.3 bits (234), Expect = 2e-22
Identities = 48/108 (44%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +2
Query: 245 KXXMQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 38 KGMVKAHQAILSACSPYFEQIFVENKHPHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 97
Query: 425 LASFISTAEQLQVKGLTGNQNEESSTPSNQSRLRGQ--APGRHNKDNL 562
L +F+ TAE L+V+GLT + + S ++ S+LR + R +D+L
Sbjct: 98 LQNFLKTAESLKVRGLTESSADRYSADTD-SKLRSERIRDSRDERDSL 144
Score = 33.5 bits (73), Expect = 0.006
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 139 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 246
D+Q+ L WNN N++ LL L DVTLA E
Sbjct: 2 DQQYCLRWNNHQPNLTTVLTTLLQDEKLCDVTLACE 37
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 97.9 bits (233), Expect = 3e-22
Identities = 48/108 (44%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +2
Query: 245 KXXMQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
K ++AH+ +LS CSPYF+++F N HPI++L+DV + +R LL FMYQGEVNV Q
Sbjct: 86 KGMVKAHQAILSACSPYFEQIFVENKHLHPIIYLRDVEVNEMRALLDFMYQGEVNVGQHN 145
Query: 425 LASFISTAEQLQVKGLTGNQNEESSTPSNQSRLRGQ--APGRHNKDNL 562
L +F+ TAE L+V+GLT + + S ++ S+LR + R +D+L
Sbjct: 146 LQNFLKTAESLKVRGLTESSADRYSADTD-SKLRSERIRDSRDERDSL 192
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 139 DEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 246
D+Q+ L WNN +N++ LL L DVTLA E
Sbjct: 50 DQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACE 85
Score = 23.0 bits (47), Expect = 9.0
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +2
Query: 326 QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEESSTP 505
QHP + S SA DL+Q E + E + + + K T N STP
Sbjct: 269 QHPSSQHQQPSRSASIDLMQSALVDERDYLAAEDREISTVENKKKRKMSTTCDNSSPSTP 328
Query: 506 SNQSRLRG 529
S + +G
Sbjct: 329 SLMNERQG 336
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 111 TSSRRYHGVGRTIFTMLEQFPRKYVSR 191
T +++Y G+ +T+L ++ R+Y R
Sbjct: 1795 TENKQYQGLPGKEYTVLGKYKRRYAMR 1821
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,800
Number of Sequences: 2352
Number of extensions: 10984
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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