Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060354.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 48 8e-06
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 43 2e-04
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 41 7e-04
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 40 0.001
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 40 0.001
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 37 0.012
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 36 0.027
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 36 0.027
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 35 0.047
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 34 0.11
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 33 0.25
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 33 0.25
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 32 0.33
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 32 0.33
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 32 0.33
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 28 5.4
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 428 ASFISTAEQLQV 463
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 428 ASFISTAEQLQV 463
+ ++TA LQ+
Sbjct: 142 QTILATASLLQL 153
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
+ AH++VLS CSPYF MF +M + ++++ L L++F Y G + + +
Sbjct: 67 INAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNV 126
Query: 428 ASFISTAEQLQV 463
+ A LQ+
Sbjct: 127 QDILPAACLLQI 138
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
AHK VLS+ S F MF + P T+ + + L DV SA LL+F+Y EV ++ E
Sbjct: 206 AHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEAES 265
Query: 425 LASFISTAEQLQVKGL 472
+ + + TA++ V +
Sbjct: 266 VMTTLYTAKKYAVPAM 281
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
+ AHK++L+ PYF+ MF ++ + + + ++D+++ + LL F Y GE+ + +
Sbjct: 62 LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNV 121
Query: 428 ASFISTA---EQLQVKGLTGNQNEESSTPSNQSRLR 526
S + A + L+V GN PSN +R
Sbjct: 122 QSIMLGANFFQMLEVVQHCGNFLLTRLHPSNALSIR 157
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ ++Y ++ + +
Sbjct: 122 IRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDYIYTDKIAITMNNV 181
Query: 428 ASFISTAEQLQV 463
I TA LQ+
Sbjct: 182 HQLIFTATVLQM 193
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ ++Y ++ + +
Sbjct: 122 IRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDYIYTDKIAITMNNV 181
Query: 428 ASFISTAEQLQV 463
I TA LQ+
Sbjct: 182 HQLIFTATVLQM 193
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVSHSALRDLLQFMYQGEVNVKQE 421
+ AHK++L+ PYF+ MF ++ + + + D+++ + LL F Y GE+ +
Sbjct: 62 LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTS 121
Query: 422 ELASFISTA---EQLQVKGLTGNQNEESSTPSNQSRLR 526
+ S + A + L+V GN PSN +R
Sbjct: 122 NVQSIMLGANFFQMLEVVQHCGNFLLTRLHPSNALSIR 159
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFKMNPT--QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
++AHK +L+ SP F M + + Q+ L+D+ + ++ +L ++Y G
Sbjct: 214 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 273
Query: 428 ASFISTAEQLQVKGL 472
++ AE+ + GL
Sbjct: 274 LDILAAAERFALPGL 288
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFKMNPT--QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 427
++AHK +L+ SP F M + + Q+ L+D+ + ++ +L ++Y G
Sbjct: 221 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 280
Query: 428 ASFISTAEQLQVKGL 472
++ AE+ + GL
Sbjct: 281 LDILAAAERFALPGL 295
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQG--EVNVKQ 418
++AH+ +L SP F+ MF M Q + ++D + ++R +++FMY G E Q
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTGATESLESQ 289
Query: 419 EELASFISTAEQLQV 463
+ ++ A++ +V
Sbjct: 290 GNIDEILAIADKYEV 304
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 263 HKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 442
H +V+ S F E F + + D ++R + +MY GE+++ + +A ++
Sbjct: 49 HSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDIPETTIADVLA 108
Query: 443 TAEQLQV 463
A L+V
Sbjct: 109 VASYLRV 115
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 266 KLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFMYQGEVNVKQEELASFI 439
K VL+ S +FQ+MF N + +K DV+HS DLL +Y + + ++ +
Sbjct: 175 KQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVIYPTHMLINSSNVSHLL 234
Query: 440 STAEQLQV 463
+++ V
Sbjct: 235 KLSDRFAV 242
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
++AHK VL+ SP F M T + ++++ D+ + + +++ ++Y G N +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271
Query: 425 LASFISTA 448
+A+ + A
Sbjct: 272 MATALLIA 279
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 254 MQAHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 424
++AHK VL+ SP F M T + ++++ D+ + + +++ ++Y G N +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271
Query: 425 LASFISTA 448
+A+ + A
Sbjct: 272 MATALLIA 279
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 439
AH+ +L+ SPYF +FK + + S L +MY G V + + ++ +
Sbjct: 55 AHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELL 114
Query: 440 STAEQLQV 463
A +
Sbjct: 115 RFANNFLI 122
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 439
AH+ +L+ SPYF +FK + + S L +MY G V + + ++ +
Sbjct: 55 AHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELL 114
Query: 440 STAEQLQV 463
A +
Sbjct: 115 RFANNFLI 122
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = +2
Query: 260 AHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 439
AH+ +L+ SPYF +FK + + S L +MY G V + + ++ +
Sbjct: 55 AHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELL 114
Query: 440 STAEQLQV 463
A +
Sbjct: 115 RFANNFLI 122
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 398 GEVNVKQEELASFISTAEQLQVKGLTGNQ 484
G K EE+ +I ++++ +GLTGNQ
Sbjct: 650 GPTKQKLEEVLDYIGCSQKINYQGLTGNQ 678
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,219,024
Number of Sequences: 27780
Number of extensions: 265413
Number of successful extensions: 617
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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