Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060353.seq
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.6  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 505  RYPPSTVWRTSRSQSGIPMSETRPPLDLDKAS 410
            R+P  T  R   + +G    ET PP+D +  S
Sbjct: 1753 RHPLLTTIRNVLADAGTGQQETIPPIDEEPPS 1784


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 514 RFPVREDK*SHPRSWAYNWLTHKLDFRY 597
           R P    K SHP  W +  +  + + R+
Sbjct: 42  RQPYPRQKKSHPPQWTWQCINQRCERRH 69


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -3

Query: 214 YAVCIFYIFCSIKIV 170
           + +CI+Y +C++ I+
Sbjct: 281 FLLCIYYFYCALIIL 295


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 351 PKSPPWDRQK*QISDKLDSCRHIIVLYKE 265
           P+S P  R+K   SDK       +V+ KE
Sbjct: 841 PRSTPDKREKSPTSDKAQEADGEVVVKKE 869


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 500 IPDARGSRCEKTSEATRDPGLTIG*HI 580
           +PDA  + C K SE  ++    I  H+
Sbjct: 67  LPDALHTECSKCSETQKNGSKKIMRHL 93


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 500 IPDARGSRCEKTSEATRDPGLTIG*HISWISDTNWIR 610
           +PDA  S C K ++  ++    +  H++     +W R
Sbjct: 66  LPDALSSGCTKCNQKQKETAEKVIRHLTQKRARDWER 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,808
Number of Sequences: 336
Number of extensions: 3923
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)