Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060353.seq
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    78   3e-16
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    29   0.14 
AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical prote...    26   1.3  
AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage ...    26   1.3  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    25   1.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.3  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.3  
AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical prote...    24   5.2  
AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosens...    24   5.2  
AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosens...    24   5.2  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   6.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.1  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 77.8 bits (183), Expect = 3e-16
 Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
 Frame = +1

Query: 259 EKFFIQYNNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHS-KKLDPLLKPYPN--- 426
           E  +I   N+P G     + +F+ V RRR+GIPSTLN +D        + +LKPYPN   
Sbjct: 44  ENGYIPIGNIPMGAVHHKNRVFVAVARRRWGIPSTLNVVDLSPPFPNTNVILKPYPNFAL 103

Query: 427 --------PEAVSSLTSVYRTAIDSCARLWMVDTGR*RFPVREDK*SHPRSWAYNWLTHK 582
                   P+A + + +VYR  +D C RLW VDTG    P        P  W+ +  T++
Sbjct: 104 NELRADLQPDA-NRIVTVYRPRVDRCDRLWFVDTGMMEIPGNFTVVQRPSVWSIDLNTNE 162

Query: 583 LDFRYELDPKVLVNERTPGGLTSLTI 660
              R+E+ PK  V   T  GLTS+T+
Sbjct: 163 PIHRFEI-PKEAV--ETGYGLTSITL 185


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 438 DRLWIWIRLQKWIQFFTVSP 379
           D  W+W++ Q+W+ F    P
Sbjct: 789 DCCWVWLKFQEWVAFIVFDP 808


>AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 500 IPDARGSRCEKTSEATRDPGLTI 568
           +PDA  + CEK SE  RD  + +
Sbjct: 64  LPDALQTNCEKCSEKQRDGAIKV 86


>AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage
           protein protein.
          Length = 127

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 500 IPDARGSRCEKTSEATRDPGLTI 568
           +PDA  + CEK SE  RD  + +
Sbjct: 64  LPDALQTNCEKCSEKQRDGAIKV 86


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 247 ARSSEKFFIQYNNVPTGIKFVGDLLFL 327
           A  S++F+ QY  VP    FVG  +FL
Sbjct: 60  AHLSQRFYEQYKAVPGSPGFVGLYIFL 86


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -1

Query: 378 VYVV*RRWN---PKSPPWDRQ-K*QISDKLDSCRHIIVLYK 268
           +Y+  R+ N   P +PPW    +    D LD C  I+ LYK
Sbjct: 245 IYLTARKHNIPLPNNPPWFVIFRVSEDDMLDVCYRIMALYK 285


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 529 LAPGTSSVRYPPSTVWRTSRSQSGIPMSETRPPL 428
           LA G  S+  PP TV  +  S  G P   + P +
Sbjct: 151 LADGLHSIPSPPITVSGSDMSSPGAPTGSSSPQI 184


>AJ973471-1|CAJ01518.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 500 IPDARGSRCEKTSEATRDPGLTIG*HISWISDTNW 604
           +PDA  + CEK SE  R     +  H+       W
Sbjct: 64  LPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEW 98


>AJ697731-1|CAG26924.1|  122|Anopheles gambiae putative chemosensory
           protein CSP2 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 500 IPDARGSRCEKTSEATRDPGLTIG*HISWISDTNW 604
           +PDA  + CEK SE  R     +  H+       W
Sbjct: 64  LPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEW 98


>AJ697730-1|CAG26923.1|  122|Anopheles gambiae putative chemosensory
           protein CSP1 protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 500 IPDARGSRCEKTSEATRDPGLTIG*HISWISDTNW 604
           +PDA  + CEK SE  R     +  H+       W
Sbjct: 64  LPDALKTNCEKCSEKQRTSSRKVIAHLEERKPQEW 98


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 665 RRIVSDVRPPGVRSLTNTFG 606
           RRI+ D   PGV  + N+ G
Sbjct: 139 RRIIEDSASPGVNKIVNSRG 158


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 152  AWKQLGYDFNGTKYIKDAD 208
            AW+   Y+++GT  I D D
Sbjct: 1049 AWQNSNYNYDGTDDIDDED 1067


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 331  VPRRRFGIPSTLNYIDRRHSKKL 399
            +P RR G+P +   +  RH ++L
Sbjct: 1119 IPMRRRGLPPSPRTVRARHERRL 1141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,427
Number of Sequences: 2352
Number of extensions: 16946
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)