Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060352.seq
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   1.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.9  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   6.9  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 242 LRPAVRTVSSPSHSFRRASGSSAVEPAPTS 153
           LRP  R+VS       + S S+ VEP PT+
Sbjct: 36  LRPRARSVSLNRVDALKVSDSTPVEPPPTA 65


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 448  GYREPLSPVPCVRRRTTAMRLGDHAHRVP 534
            G   PLSP+   RRR  A R    AH +P
Sbjct: 1147 GMAPPLSPILSPRRRRQAQRQA-RAHMLP 1174


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 163 HRLPLPTPFYFPVFVAAFKLRYYSMN 86
           HRLP  T    P  V  +K+  Y+MN
Sbjct: 312 HRLPTVTGIMIPKGVDWWKVSQYAMN 337


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,912
Number of Sequences: 2352
Number of extensions: 12523
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)