Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060352.seq
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096270-1|BAC04744.1|  136|Homo sapiens protein ( Homo sapiens ...    35   0.31 
AY523978-1|AAS16936.1|  644|Homo sapiens truncated RMO1c splice ...    34   0.42 
AY523977-1|AAS16935.1|  649|Homo sapiens RMO1 protein.                 34   0.42 
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.         34   0.42 
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.        34   0.42 
AC018891-2|AAY14676.1|  649|Homo sapiens unknown protein.              34   0.42 
AB053311-1|BAB69020.1|  649|Homo sapiens ALS2CR9 protein.              34   0.42 
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.     34   0.42 

>AK096270-1|BAC04744.1|  136|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38951 fis, clone NT2NE2018739. ).
          Length = 136

 Score = 34.7 bits (76), Expect = 0.31
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRTTEP 470
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG    SK ++  T   
Sbjct: 66  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKAT 118

Query: 471 CTVRQEKDNS 500
              R   D S
Sbjct: 119 GATRTLADCS 128


>AY523978-1|AAS16936.1|  644|Homo sapiens truncated RMO1c splice
           variant protein.
          Length = 644

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSG 425
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG
Sbjct: 66  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG 106


>AY523977-1|AAS16935.1|  649|Homo sapiens RMO1 protein.
          Length = 649

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSG 425
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG
Sbjct: 66  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG 106


>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
          Length = 1250

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSG 425
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG
Sbjct: 66  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG 106


>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
          Length = 1250

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSG 425
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG
Sbjct: 66  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG 106


>AC018891-2|AAY14676.1|  649|Homo sapiens unknown protein.
          Length = 649

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSG 425
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG
Sbjct: 66  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG 106


>AB053311-1|BAB69020.1|  649|Homo sapiens ALS2CR9 protein.
          Length = 649

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSG 425
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG
Sbjct: 66  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG 106


>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
          Length = 1236

 Score = 34.3 bits (75), Expect = 0.42
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
 Frame = +3

Query: 303 TYRFSMANLEET----QDADLDAILGELCALDSEYDEELSRVSSG 425
           +YRFS+ NL E     +  DLDA++ +LC++    ++ELS + SG
Sbjct: 52  SYRFSIYNLNEALNQGETVDLDALMADLCSI----EQELSSIGSG 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,258,295
Number of Sequences: 237096
Number of extensions: 1756370
Number of successful extensions: 4975
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4967
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)