Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060349.seq
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          28   0.097
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.5  

>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 27.9 bits (59), Expect = 0.097
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 565 VSTTLNSTARMPPRTMKVSHDGSDGKPP*STASS 464
           V  T++S  + PPR+++ S+D S G  P S+ SS
Sbjct: 49  VENTISSVPQ-PPRSLEGSYDSSSGDSPVSSHSS 81


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -2

Query: 232 CVTTEELKLLHFGL*KCHD*VVIADCFFDNETVGSVLATEDR 107
           CV+ E L +    L  CH  VV   C  +       L TEDR
Sbjct: 301 CVSGEHLSVSGGALNDCHAEVVARRCLCEYLYKQLELHTEDR 342


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 87 LLLSAILFKIYC*NLRTIIIFIT 19
          +LLS+  F++    L TI+IF+T
Sbjct: 1  MLLSSAWFEVIAAVLLTILIFVT 23


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 271 CKRFPWAFALEQ 236
           CK FPW F +++
Sbjct: 292 CKAFPWHFVVDR 303


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/41 (24%), Positives = 16/41 (39%)
 Frame = +3

Query: 543 VEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEXEALNAG 665
           +   +  T      I+ P     C+  PIKR ++    N G
Sbjct: 114 ITLNIESTSNKMTVILTPPGRFFCEVRPIKRVKDSTNCNCG 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,709
Number of Sequences: 438
Number of extensions: 4127
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)