Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060348.seq
(676 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17GP9 Cluster: Putative uncharacterized protein; n=1; ... 78 2e-13
UniRef50_UPI0000D56BCB Cluster: PREDICTED: similar to CG8928-PA;... 71 2e-11
UniRef50_UPI00015B4B7A Cluster: PREDICTED: similar to conserved ... 66 6e-10
UniRef50_UPI0000DB74FF Cluster: PREDICTED: similar to nuclear DN... 63 5e-09
UniRef50_Q13901 Cluster: C1D protein; n=21; Euteleostomi|Rep: C1... 60 4e-08
UniRef50_Q61368 Cluster: C1D protein; n=10; Euteleostomi|Rep: C1... 60 5e-08
UniRef50_A7SDV0 Cluster: Predicted protein; n=1; Nematostella ve... 58 1e-07
UniRef50_Q5KPR2 Cluster: Expressed protein; n=1; Filobasidiella ... 54 4e-06
UniRef50_Q4PH37 Cluster: Putative uncharacterized protein; n=3; ... 46 0.001
UniRef50_A6QUY4 Cluster: Predicted protein; n=2; Onygenales|Rep:... 40 0.055
UniRef50_Q0V743 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_A3LWV2 Cluster: Predicted protein; n=2; Saccharomycetac... 38 0.22
UniRef50_A5DIL7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_A3BRE0 Cluster: Putative uncharacterized protein; n=3; ... 36 0.90
UniRef50_Q5A795 Cluster: Potential nuclear exosome component Lrp... 36 0.90
UniRef50_A5DU17 Cluster: Putative uncharacterized protein; n=1; ... 36 0.90
UniRef50_Q01CD3 Cluster: DNA-binding protein C1D involved in reg... 35 2.1
UniRef50_Q0A9T6 Cluster: Polypeptide-transport-associated domain... 34 2.7
UniRef50_UPI00006CCFC5 Cluster: hypothetical protein TTHERM_0018... 34 3.6
UniRef50_Q5KFN3 Cluster: Expressed protein; n=2; Filobasidiella ... 34 3.6
UniRef50_Q245I1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_Q74KJ1 Cluster: Putative uncharacterized protein; n=2; ... 33 6.3
UniRef50_A2RMU9 Cluster: Transcriptional regulator, MerR family;... 33 6.3
UniRef50_A0AMB0 Cluster: Complete genome; n=1; Listeria welshime... 33 6.3
UniRef50_Q86KX8 Cluster: Similar to Dictyostelium discoideum (Sl... 33 6.3
UniRef50_Q9PFP9 Cluster: Mannosyltransferase; n=6; Xanthomonadac... 33 8.4
UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and... 33 8.4
>UniRef50_Q17GP9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 152
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 7/86 (8%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKD-RQKRPTVNVEVAKRLVRNG 433
+NSL+W++ + G+DP KH IKDEL RIKA M++ +E+ D R RPT++ AKR VR G
Sbjct: 67 INSLYWMYYKIIGLDPNKHGIKDELTRIKAAMMREKEIYDHRFNRPTLDQGAAKRFVRAG 126
Query: 434 LYDH--QRAPVKQL----NKRIKFSD 493
L+DH + P+ + NK+I+F D
Sbjct: 127 LFDHKNRNKPLDKADTPPNKKIRFED 152
Score = 40.7 bits (91), Expect = 0.032
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 81 DFKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFFVY 254
DF YGEL D F+N E L + + ++Q L KNY+ SL +++ DL Y
Sbjct: 8 DFDYGELKNDTAFINKNETLSQCIERIRQNLAIAREDYKNYEGFSLEEKVKYDLHLSY 65
>UniRef50_UPI0000D56BCB Cluster: PREDICTED: similar to CG8928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8928-PA - Tribolium castaneum
Length = 139
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQ-KRPTVNVEVAKRLVRNG 433
LN+L W++L+TKG DPTK IK++L R+K M+K +E +RQ RP ++ A R +++G
Sbjct: 58 LNTLFWLYLKTKGEDPTKSEIKNQLNRVKQYMVKAKEAHERQVLRPRIDCGAAGRFIKHG 117
Query: 434 L-YDHQRAPVKQLNKRIKFSDN 496
+ Y P + NK++KFSD+
Sbjct: 118 INYKDSGTPEEPPNKKMKFSDD 139
>UniRef50_UPI00015B4B7A Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 147
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQK-RPTVNVEVAKRLVRNG 433
LNSL W+++R +GIDPTKH IK E R+K +M++ +++ DR P +N + A+R VR+G
Sbjct: 60 LNSLFWMYMRAEGIDPTKHQIKSENERLKQSMIRAKQIHDRNTIMPRINRDAAQRFVRSG 119
Query: 434 LYDHQRAPVKQLNKRIKFSDNEE 502
L+ PV++ + + N++
Sbjct: 120 LW----VPVQRAEENSNENTNDQ 138
>UniRef50_UPI0000DB74FF Cluster: PREDICTED: similar to nuclear
DNA-binding protein; n=1; Apis mellifera|Rep: PREDICTED:
similar to nuclear DNA-binding protein - Apis mellifera
Length = 128
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +2
Query: 182 PSVEEKLRQNVTTSSD*TRFVFCIPLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKW 361
P++ EKL N +C LNS+ W++LR +GIDP KH IK E R+K +M +
Sbjct: 38 PAIYEKL-SNTDKIEYNLLMSYC--LNSMFWMYLRAEGIDPAKHRIKLENDRLKKSMTRA 94
Query: 362 QEVKDRQK-RPTVNVEVAKRLVRNGLYD 442
+++ D++ P +N + A+R VRNGL++
Sbjct: 95 KQINDKKTLMPHINKDAAQRFVRNGLWE 122
>UniRef50_Q13901 Cluster: C1D protein; n=21; Euteleostomi|Rep: C1D
protein - Homo sapiens (Human)
Length = 141
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/62 (38%), Positives = 43/62 (69%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
LNS+ W++L T+G++P +HP+K EL RI+ M + +E+ D++K ++ A R V+N L
Sbjct: 63 LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122
Query: 437 YD 442
++
Sbjct: 123 WE 124
>UniRef50_Q61368 Cluster: C1D protein; n=10; Euteleostomi|Rep: C1D
protein - Mus musculus (Mouse)
Length = 141
Score = 60.1 bits (139), Expect = 5e-08
Identities = 24/65 (36%), Positives = 44/65 (67%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
LNS+ W++L T+G++P +HP+K EL RI+ M + +E+ D++K ++ A R V+ L
Sbjct: 63 LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAAKLDRGAASRFVKKAL 122
Query: 437 YDHQR 451
++ +R
Sbjct: 123 WEPKR 127
>UniRef50_A7SDV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 169
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +2
Query: 242 VFCIPLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQK-RPTVNVEVAKR 418
V +NSL W++L T+G+DP +HPIK EL RIK M+K +EV+ +Q+ ++ AKR
Sbjct: 59 VVAYSINSLFWMYLITQGMDPKEHPIKQELDRIKKYMVKVKEVQHKQEVSMRIDKGAAKR 118
Query: 419 LVRNGLY 439
V++ L+
Sbjct: 119 FVKSALW 125
>UniRef50_Q5KPR2 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 206
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQK-RPTVNVEVAKRLVRNG 433
+N L W++L+TKGIDPTKH + EL RIK K + ++ RP V+ A R V +
Sbjct: 55 INDLVWVYLKTKGIDPTKHDVTAELERIKTYYSKVSSAEGHEEIRPKVDAAAAHRFVSSS 114
Query: 434 LYDHQRAP 457
+ Q P
Sbjct: 115 IPRTQHLP 122
>UniRef50_Q4PH37 Cluster: Putative uncharacterized protein; n=3;
Ustilaginaceae|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 237
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRP 391
L L WI L+TKG+D HP+ EL R+K+ K + V+D++K P
Sbjct: 73 LLDLVWILLKTKGVDTKDHPVMQELERVKSYFGKIKSVQDKEKEP 117
>UniRef50_A6QUY4 Cluster: Predicted protein; n=2; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 249
Score = 39.9 bits (89), Expect = 0.055
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKD-RQKRPT-VNVEVAKRLVRN 430
+ SL + +LR +G++ +HP+ EL R+K K + V+ +KR T V+ E A R +++
Sbjct: 55 IESLIFSYLRLQGVNAKEHPVFKELTRVKQYFEKIKTVETVPEKRTTAVDKEAAGRFIKH 114
Query: 431 GLYDHQRAPVKQLNKRIK 484
GL + + +++ + K
Sbjct: 115 GLAGNDKYDLERAEREAK 132
>UniRef50_Q0V743 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 363
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRP--TVNVEVAKRLVRN 430
+ SL + L+ G++ +HPI EL R+K K + V++R P ++V A R +++
Sbjct: 56 IESLLYSTLQASGVNAKEHPIFKELARLKGYFGKIKHVEERPVVPKSKLDVSAAARFIKH 115
Query: 431 GLYDHQRAPVKQLNKRIK 484
GL +++ +++ + K
Sbjct: 116 GLAGNEKYDLERAERMAK 133
>UniRef50_A3LWV2 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 143
Score = 37.9 bits (84), Expect = 0.22
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 185 SVEEKLRQNVTTSSD*TRFV--FCIPLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLK 358
S+ E + +N TT + + L S+ + +L+T G+D KHPI EL RI+A M +
Sbjct: 32 SLAELVAENSTTPFERIKLYNNSAYTLISVIYSYLKTAGVDTDKHPISQELTRIRAYMKR 91
Query: 359 WQEVK 373
+E++
Sbjct: 92 AKELE 96
>UniRef50_A5DIL7 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 183
Score = 37.5 bits (83), Expect = 0.29
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +2
Query: 278 HLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDR-QKRPT--VNVEVAKRLVRNGL 436
+L++ G+ HPI +EL RIK +M K +E++ + Q + T + E AKRL++ L
Sbjct: 63 YLKSTGVKTESHPIMEELARIKKSMNKVKELEQKLQLKDTSAQDSETAKRLIQQAL 118
>UniRef50_A3BRE0 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 209
Score = 35.9 bits (79), Expect = 0.90
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 284 RTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRP-----TVNVEVAKRLVRNGL 436
R G+DP +HPIK E R+ K +D K P TVN + A R + + L
Sbjct: 79 RCSGVDPDEHPIKKEFERLSLWEEKLNRFEDWDKAPLRPTTTVNTQAAARFIGHSL 134
>UniRef50_Q5A795 Cluster: Potential nuclear exosome component Lrp1p;
n=1; Candida albicans|Rep: Potential nuclear exosome
component Lrp1p - Candida albicans (Yeast)
Length = 232
Score = 35.9 bits (79), Expect = 0.90
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 245 FCIPLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKD 376
F L S + +L++ GID HPIK EL RIK++M + + +K+
Sbjct: 64 FAYLLISTLFSYLKSLGIDTDSHPIKMELSRIKSSMNRLKNIKN 107
>UniRef50_A5DU17 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 226
Score = 35.9 bits (79), Expect = 0.90
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +2
Query: 185 SVEEKLRQNVTTSSD*TRFV--FCIPLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLK 358
S++E L Q T+ D +F+ F L S + +L+T G++ +HPIK+EL R+K M++
Sbjct: 32 SLDEHLAQQ-ETAKDKIQFLNNFQYVLVSTIFSYLKTIGVNTDEHPIKNELARVKNFMMR 90
>UniRef50_Q01CD3 Cluster: DNA-binding protein C1D involved in
regulation of double-strand break repair; n=2;
Ostreococcus|Rep: DNA-binding protein C1D involved in
regulation of double-strand break repair - Ostreococcus
tauri
Length = 186
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 263 SLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDR 379
+L ++LRT G+DP+KH ++ EL R++ K +E + R
Sbjct: 68 TLFEMYLRTLGVDPSKHAVRKELERVETYEGKIEETRRR 106
>UniRef50_Q0A9T6 Cluster: Polypeptide-transport-associated domain
protein, ShlB-type precursor; n=1; Alkalilimnicola
ehrlichei MLHE-1|Rep: Polypeptide-transport-associated
domain protein, ShlB-type precursor - Alkalilimnicola
ehrlichei (strain MLHE-1)
Length = 561
Score = 34.3 bits (75), Expect = 2.7
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 242 VFCIPLNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRL 421
V C+PL + +H +T G P P D L+++ + + + +++R RP L
Sbjct: 18 VVCLPLLTAGAVHAQTPGAQPEPGPGVDPALQLRELLRERERLEERGPRPEEPELDIPEL 77
Query: 422 VRNGLYDHQRAPVKQLNKRIKFSDNE 499
V L D + V+ L + I+FS E
Sbjct: 78 V---LPDLEDETVEFLLREIRFSPTE 100
>UniRef50_UPI00006CCFC5 Cluster: hypothetical protein
TTHERM_00188640; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00188640 - Tetrahymena
thermophila SB210
Length = 467
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 81 DFKYGE---LAKDKDFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLF 245
+FKY ++ + N++NLK+ I+ Q + K L LKK K +P +LD+F
Sbjct: 288 NFKYSNSINISSNSSSQVNIKNLKDIFIKAVQEVQKRLRLKKLQMKQGVPGSDQLDIF 345
>UniRef50_Q5KFN3 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 886
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 287 TKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAK 415
T+ DPT+H + EL+R+K L+ Q + R+K +E+A+
Sbjct: 148 TEAEDPTRHVLWTELIRLKTRSLELQIAEARRKEKEAELELAR 190
>UniRef50_Q245I1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 345
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Frame = +3
Query: 63 CQELN-----WDFKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMS 215
C+EL +D K G L K +++++NV ++ +VQQ+L + L ++YD+++
Sbjct: 113 CEELQRLSEKFDKKLGTLKKYEEYLDNVIKSEDQYQDVQQILTQYTKLTQSYDELN 168
>UniRef50_Q74KJ1 Cluster: Putative uncharacterized protein; n=2;
Lactobacillus|Rep: Putative uncharacterized protein -
Lactobacillus johnsonii
Length = 264
Score = 33.1 bits (72), Expect = 6.3
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +2
Query: 305 TKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGLYDHQRAPV-------K 463
+K KDE++R+K + ++ E+K + V VE +R N + P+
Sbjct: 8 SKENKKDEIVRVKISDEEFNELKIKLSSGDVTVEQGERFAVNFIGKRHYLPIVQLENGRL 67
Query: 464 QLNKRIKFSDNEE*FLKELI 523
QL +RI DN+E LK ++
Sbjct: 68 QLKQRINLIDNDEAHLKVVV 87
>UniRef50_A2RMU9 Cluster: Transcriptional regulator, MerR family;
n=3; Lactococcus lactis|Rep: Transcriptional regulator,
MerR family - Lactococcus lactis subsp. cremoris (strain
MG1363)
Length = 134
Score = 33.1 bits (72), Expect = 6.3
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 123 NNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELD 239
+ VE L+ +IE Q LD L +NYD++ LP+++ L+
Sbjct: 87 SQVEQLRTEIIEKQSALDYLTFKIENYDEVMLPSEMNLN 125
>UniRef50_A0AMB0 Cluster: Complete genome; n=1; Listeria welshimeri
serovar 6b str. SLCC5334|Rep: Complete genome - Listeria
welshimeri serovar 6b (strain ATCC 35897 / DSM 20650
/SLCC5334)
Length = 129
Score = 33.1 bits (72), Expect = 6.3
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +3
Query: 84 FKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMSL-PAQIELDLFFVYL* 260
F+ E +++ N+ +K++LIEV+ DK+ + + K+S P +++++LFF YL
Sbjct: 55 FQTSESSREYANAINLVKVKKHLIEVRITEDKVKEIGVSVIKISFNPNKVDMNLFFNYLR 114
Query: 261 IHYIG 275
+IG
Sbjct: 115 NIFIG 119
>UniRef50_Q86KX8 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Interaptin; n=2; Dictyostelium discoideum|Rep:
Similar to Dictyostelium discoideum (Slime mold).
Interaptin - Dictyostelium discoideum (Slime mold)
Length = 1781
Score = 33.1 bits (72), Expect = 6.3
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 105 KDKDFVNNVENLKENLIEVQQVLDKLLPLKKNYDKMSLPAQIELDLFF 248
K D E L++N I++ Q+ DK+ K N+D+++ Q+E + F
Sbjct: 745 KQDDLNRQQEQLQKNSIDIDQLFDKINLGKSNFDELNQRYQVEQNQLF 792
>UniRef50_Q9PFP9 Cluster: Mannosyltransferase; n=6;
Xanthomonadaceae|Rep: Mannosyltransferase - Xylella
fastidiosa
Length = 849
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +2
Query: 350 MLKWQEVKDRQKRPTVN-----VEVAKRLVRNGLYDHQRAPVKQLNKRIKF 487
+L W + + QKRP V ++ L G+ +H+ + ++QLN R+ F
Sbjct: 611 VLAWMDEQQLQKRPDVRWFHLGADIQSSLPSQGMLEHEHSVLEQLNGRVSF 661
>UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and
fatty acid-binding glycoprotein) [Contains:
Apolipophorin-2 (Apolipophorin II) (ApoL2);
Apolipophorin-1 (Apolipophorin I) (ApoL1)]; n=11;
Eukaryota|Rep: Apolipophorins precursor (Retinoid- and
fatty acid-binding glycoprotein) [Contains:
Apolipophorin-2 (Apolipophorin II) (ApoL2);
Apolipophorin-1 (Apolipophorin I) (ApoL1)] - Drosophila
melanogaster (Fruit fly)
Length = 3351
Score = 32.7 bits (71), Expect = 8.4
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 78 WDFKYGELAKDKDFVNNVENLKENLIEVQQVLDKLLPLKK 197
W E+ KD ++++ EN+KE L + +QV DK++ L K
Sbjct: 2424 WHIVESEINKDSEYIS--ENIKERLKKSRQVTDKIVKLAK 2461
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,618,377
Number of Sequences: 1657284
Number of extensions: 10605775
Number of successful extensions: 28169
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28153
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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