Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060348.seq
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.0  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   5.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 203 VIFLQRKEFIEYLLYFY*ILFQIFNIVH 120
           V+ +QR    + L ++  + F +FN+VH
Sbjct: 510 VLRVQRFNNYQSLAHYLRVFFTVFNVVH 537


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 111 KDFVNNVENLKENLIEVQQVLD 176
           K+FVNNV  L E L ++ Q ++
Sbjct: 109 KNFVNNVAALDETLAKLGQYIN 130


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 356 KWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           KW    D  + PTV  EV +  +  G+
Sbjct: 31  KWNVFDDPPREPTVGSEVKRTYIEWGV 57


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 356 KWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           KW    D  + PTV  EV +  +  G+
Sbjct: 31  KWNVFDDPPREPTVGSEVKRTYIEWGV 57


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 273 GYIYEQKASIPQN 311
           GYIY+ +  +PQN
Sbjct: 263 GYIYDDEMVVPQN 275


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 273 GYIYEQKASIPQN 311
           GYIY+ +  +PQN
Sbjct: 88  GYIYDDEMVVPQN 100


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 240 LFFVYL*IHYIGYIYEQKASIPQNI 314
           LF V+  +    Y+Y ++ ++PQNI
Sbjct: 5   LFVVFACVQ--AYVYAEEYTVPQNI 27


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 237 LVQSELVVTFCRNFS 193
           L QSEL +T C+ FS
Sbjct: 400 LSQSELEITACKFFS 414


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,044
Number of Sequences: 336
Number of extensions: 2843
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)