Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060348.seq
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    25   2.2  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   2.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   2.2  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   8.8  

>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 426 RTKRFATSTLTVGLFWRSFTSC 361
           + K+F   TL VG F+R++ +C
Sbjct: 71  KNKKFTIGTLGVGSFFRAWRNC 92


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 377 RQKRPTVNVEVAKRLV---RNGLYDHQRAPVKQLNKRIKFSDNEE*FLKEL 520
           RQ+R   N  V +  V   R+  ++H     + LN  IKFS++     +E+
Sbjct: 480 RQRRNQYNQHVREGSVYFQRSSTFNHHNGHQRNLNPHIKFSNSHSNLPEEI 530


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 377 RQKRPTVNVEVAKRLV---RNGLYDHQRAPVKQLNKRIKFSDNEE*FLKEL 520
           RQ+R   N  V +  V   R+  ++H     + LN  IKFS++     +E+
Sbjct: 481 RQRRNQYNQHVREGSVYFQRSSTFNHHNGHQRNLNPHIKFSNSHSNLPEEI 531


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 513 FKNYSSLSENFIRLFSCFTGAL*WSY 436
           F+ +   S  F   +S F+GA+ W Y
Sbjct: 212 FEGHLKYSPLFYGYYSTFSGAIAWGY 237


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,283
Number of Sequences: 2352
Number of extensions: 10816
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)