Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060348.seq
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017884-1|AAH17884.1|  134|Homo sapiens Unknown (protein for IM...    62   2e-09
X95592-1|CAA64845.1|  141|Homo sapiens C1D protein protein.            60   5e-09
BC016284-1|AAH16284.1|  141|Homo sapiens nuclear DNA-binding pro...    60   5e-09
BC009589-1|AAH09589.1|  141|Homo sapiens nuclear DNA-binding pro...    60   5e-09
BC009584-1|AAH09584.1|  141|Homo sapiens nuclear DNA-binding pro...    60   5e-09
BC005235-1|AAH05235.1|  141|Homo sapiens nuclear DNA-binding pro...    60   5e-09
AC079112-1|AAX88887.1|  141|Homo sapiens unknown protein.              60   5e-09

>BC017884-1|AAH17884.1|  134|Homo sapiens Unknown (protein for
           IMAGE:4295997) protein.
          Length = 134

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/70 (35%), Positives = 47/70 (67%)
 Frame = +2

Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           LNS+ W++L T+G++P +HP+K EL RI+  M + +E+ D++K   ++   A R V+N L
Sbjct: 63  LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122

Query: 437 YDHQRAPVKQ 466
           ++ ++   K+
Sbjct: 123 WEPKKKKKKK 132


>X95592-1|CAA64845.1|  141|Homo sapiens C1D protein protein.
          Length = 141

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/62 (38%), Positives = 43/62 (69%)
 Frame = +2

Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           LNS+ W++L T+G++P +HP+K EL RI+  M + +E+ D++K   ++   A R V+N L
Sbjct: 63  LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122

Query: 437 YD 442
           ++
Sbjct: 123 WE 124


>BC016284-1|AAH16284.1|  141|Homo sapiens nuclear DNA-binding
           protein protein.
          Length = 141

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/62 (38%), Positives = 43/62 (69%)
 Frame = +2

Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           LNS+ W++L T+G++P +HP+K EL RI+  M + +E+ D++K   ++   A R V+N L
Sbjct: 63  LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122

Query: 437 YD 442
           ++
Sbjct: 123 WE 124


>BC009589-1|AAH09589.1|  141|Homo sapiens nuclear DNA-binding
           protein protein.
          Length = 141

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/62 (38%), Positives = 43/62 (69%)
 Frame = +2

Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           LNS+ W++L T+G++P +HP+K EL RI+  M + +E+ D++K   ++   A R V+N L
Sbjct: 63  LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122

Query: 437 YD 442
           ++
Sbjct: 123 WE 124


>BC009584-1|AAH09584.1|  141|Homo sapiens nuclear DNA-binding
           protein protein.
          Length = 141

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/62 (38%), Positives = 43/62 (69%)
 Frame = +2

Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           LNS+ W++L T+G++P +HP+K EL RI+  M + +E+ D++K   ++   A R V+N L
Sbjct: 63  LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122

Query: 437 YD 442
           ++
Sbjct: 123 WE 124


>BC005235-1|AAH05235.1|  141|Homo sapiens nuclear DNA-binding
           protein protein.
          Length = 141

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/62 (38%), Positives = 43/62 (69%)
 Frame = +2

Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           LNS+ W++L T+G++P +HP+K EL RI+  M + +E+ D++K   ++   A R V+N L
Sbjct: 63  LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122

Query: 437 YD 442
           ++
Sbjct: 123 WE 124


>AC079112-1|AAX88887.1|  141|Homo sapiens unknown protein.
          Length = 141

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 24/62 (38%), Positives = 43/62 (69%)
 Frame = +2

Query: 257 LNSLHWIHLRTKGIDPTKHPIKDELLRIKATMLKWQEVKDRQKRPTVNVEVAKRLVRNGL 436
           LNS+ W++L T+G++P +HP+K EL RI+  M + +E+ D++K   ++   A R V+N L
Sbjct: 63  LNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKNAL 122

Query: 437 YD 442
           ++
Sbjct: 123 WE 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,082,505
Number of Sequences: 237096
Number of extensions: 1584481
Number of successful extensions: 2831
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2827
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)