Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060344.seq
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   116   9e-28
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   2.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.8  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    24   3.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.0  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   5.0  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  116 bits (278), Expect = 9e-28
 Identities = 58/137 (42%), Positives = 72/137 (52%)
 Frame = +3

Query: 258 IQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRP 437
           +QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK TA+ + K  +KYRP
Sbjct: 51  VQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKPTAQQVMKCWKKYRP 110

Query: 438 ETXXXXXXXXXXXXXXXXXXXDEPHQRGPTPSDPAQTQSPSWSRRRRAHXXXXXXXXXXX 617
           E                    +EP  +                 +++A            
Sbjct: 111 ENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVEQKKAQLVIIAHDVDPI 170

Query: 618 XXXXXXPAXCRKMGVPY 668
                 PA CRKMGVPY
Sbjct: 171 ELVVYLPALCRKMGVPY 187



 Score = 30.3 bits (65), Expect = 0.058
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 211 NPLFEKRPKNFAIGQ 255
           NPLFEKR KN+ IGQ
Sbjct: 35  NPLFEKRVKNYGIGQ 49


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 294 WPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 440
           W  ++    +    + RLKV     + T+T+++  A+ +   L ++RPE
Sbjct: 216 WKLFLMTSYRSVARKLRLKVCS--RELTETVERVAAEAINSKLHEHRPE 262


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 449  CFSLRPVFLQNLEKALSCSLVQCLGKLVDRRGH 351
            CF  + V ++ +    S + +  L + V RRGH
Sbjct: 1454 CFVTKAVHIELVSNLTSSAFLAALRRFVARRGH 1486


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 369 G*SEGALSDDAEVQPSDAGCG 307
           G  +G  + DA V+P + GCG
Sbjct: 174 GLGDGPTARDATVRPEERGCG 194


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 259 FSQLVTCPDL*DGPSISASSVRRLYFSVV*KCPLRSTNLPRHWTRLQL 402
           ++ ++  P   DG S    S++RL+  V  +    + +LP + TRLQL
Sbjct: 831 YASIIWNPPTIDGCS-RIESIQRLFTRVAFRRLFGAASLPPYETRLQL 877


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 488 LSFSSFPQPLFPGCFSLRPVFLQNLEKAL 402
           + F  F QP+F  C+ L  + L+N+   +
Sbjct: 506 IKFGLFFQPIFSVCWFLEVIALENVHSCV 534


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,305
Number of Sequences: 2352
Number of extensions: 11724
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)