BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060342.seq
(690 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 27 0.56
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 27 0.56
AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding pr... 27 0.74
AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1... 25 3.0
AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1... 25 3.0
AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1... 25 3.0
AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant r... 25 3.0
AY363726-1|AAR14939.1| 331|Anopheles gambiae seven transmembran... 24 5.2
AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CY... 23 6.9
AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor O... 23 9.1
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.1
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.1
AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembran... 23 9.1
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 9.1
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.1 bits (57), Expect = 0.56
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 331 PYSQHASHPSDHSLIYHDA 387
PY QH HP+ H + H A
Sbjct: 173 PYPQHVLHPAHHPALLHPA 191
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.1 bits (57), Expect = 0.56
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 331 PYSQHASHPSDHSLIYHDA 387
PY QH HP+ H + H A
Sbjct: 173 PYPQHVLHPAHHPALLHPA 191
>AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding
protein AgamOBP53 protein.
Length = 171
Score = 26.6 bits (56), Expect = 0.74
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 266 AMWGALEMYCPHHCQMWKLVP 328
A+W L+ PH CQM +L+P
Sbjct: 20 ALWLFLKFEVPHCCQMEELIP 40
>AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 24.6 bits (51), Expect = 3.0
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 23 LELTLEHFTTKAMLRFHPKLGSERGSEWLCCFCLHVRTGTIIL 151
L TL H K F P L S G WL F + V TII+
Sbjct: 77 LNCTLYH--PKQREEFSPVLRSMSGVFWLMIFLMFVAIFTIIM 117
>AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 24.6 bits (51), Expect = 3.0
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 23 LELTLEHFTTKAMLRFHPKLGSERGSEWLCCFCLHVRTGTIIL 151
L TL H K F P L S G WL F + V TII+
Sbjct: 77 LNCTLYH--PKQREEFSPVLRSMSGVFWLMIFLMFVAIFTIIM 117
>AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 24.6 bits (51), Expect = 3.0
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 23 LELTLEHFTTKAMLRFHPKLGSERGSEWLCCFCLHVRTGTIIL 151
L TL H K F P L S G WL F + V TII+
Sbjct: 77 LNCTLYH--PKQREEFSPVLRSMSGVFWLMIFLMFVAIFTIIM 117
>AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant
receptor Or1 protein.
Length = 417
Score = 24.6 bits (51), Expect = 3.0
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 23 LELTLEHFTTKAMLRFHPKLGSERGSEWLCCFCLHVRTGTIIL 151
L TL H K F P L S G WL F + V TII+
Sbjct: 111 LNCTLYH--PKQREEFSPVLQSMSGVFWLMIFLMFVAIFTIIM 151
>AY363726-1|AAR14939.1| 331|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 331
Score = 23.8 bits (49), Expect = 5.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = +2
Query: 452 LVGNRLICCPSSVFRSSTLHHHFDGN-------WAICVTCVKSM 562
+ GNRLI SSV +++ H +DG+ +C C K+M
Sbjct: 255 IFGNRLIEESSSVMKAAYSCHWYDGSEEAKTFVQIVCQQCQKAM 298
>AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450
CYP9K1 protein.
Length = 531
Score = 23.4 bits (48), Expect = 6.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 197 AAIVRDPRLLDELDR 241
AAI+RDP+L E DR
Sbjct: 431 AAIMRDPQLFPEPDR 445
>AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor
Or83b protein.
Length = 478
Score = 23.0 bits (47), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = +2
Query: 452 LVGNRLICCPSSVFRSSTLHHHFDGN-------WAICVTCVKSM 562
+ GNRLI SSV ++ H +DG+ +C C K+M
Sbjct: 402 IFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAM 445
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 335 TLNMLHILVTTA*YTMMRMWVR--WLQWVPWL 424
T+ +L+ TA M W++ +LQW+PW+
Sbjct: 312 TVVVLNYHHRTADIHEMPPWIKSVFLQWLPWI 343
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 335 TLNMLHILVTTA*YTMMRMWVR--WLQWVPWL 424
T+ +L+ TA M W++ +LQW+PW+
Sbjct: 312 TVVVLNYHHRTADIHEMPPWIKSVFLQWLPWI 343
>AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 478
Score = 23.0 bits (47), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = +2
Query: 452 LVGNRLICCPSSVFRSSTLHHHFDGN-------WAICVTCVKSM 562
+ GNRLI SSV ++ H +DG+ +C C K+M
Sbjct: 402 IFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAM 445
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.0 bits (47), Expect = 9.1
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 166 VPAPSGTRSFSSDCA*SSIAG*TGP*VIPRSSWSNVGRTGDVLPTPLSNVETRPSPY 336
+PAP+ ++ SS A P V+PR+S N G + P PL++ + P PY
Sbjct: 597 LPAPTPRNNYKP----SSAAA--APYVLPRASEVNDFFYGGLEPVPLASWQL-PPPY 646
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,280
Number of Sequences: 2352
Number of extensions: 16910
Number of successful extensions: 43
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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