Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060342.seq
(690 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061575-1|AAL29123.1| 428|Drosophila melanogaster SD02746p pro... 105 6e-23
AE013599-703|AAM68833.2| 428|Drosophila melanogaster CG14767-PA... 105 6e-23
AF317419-1|AAK69597.1| 432|Drosophila melanogaster lysosomal-as... 102 4e-22
AE013599-705|AAF59049.3| 432|Drosophila melanogaster CG14767-PC... 102 4e-22
AE013599-704|AAF59050.2| 432|Drosophila melanogaster CG14767-PB... 102 4e-22
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ... 29 4.5
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA... 29 4.5
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro... 29 6.0
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ... 29 6.0
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,... 29 6.0
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,... 29 6.0
AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p pro... 29 7.9
AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA... 29 7.9
>AY061575-1|AAL29123.1| 428|Drosophila melanogaster SD02746p
protein.
Length = 428
Score = 105 bits (252), Expect = 6e-23
Identities = 53/108 (49%), Positives = 71/108 (65%)
Frame = +1
Query: 271 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMIYGA 450
V + LPTPLS VE PY+ DHSL Y + D+G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYAYR-----DHSLNYQNFDMGGLVCTCMIAITLMMIYGT 141
Query: 451 ARGKPAYLLPFFCXQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 594
+GKP++LLPFFC Q+FDFA GYLCYL+ IH++IAE+ R+P+
Sbjct: 142 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESHRLPW 189
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +2
Query: 83 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELD 238
G+ E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+
Sbjct: 31 GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELE 82
>AE013599-703|AAM68833.2| 428|Drosophila melanogaster CG14767-PA,
isoform A protein.
Length = 428
Score = 105 bits (252), Expect = 6e-23
Identities = 53/108 (49%), Positives = 71/108 (65%)
Frame = +1
Query: 271 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMIYGA 450
V + LPTPLS VE PY+ DHSL Y + D+G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYAYR-----DHSLNYQNFDMGGLVCTCMIAITLMMIYGT 141
Query: 451 ARGKPAYLLPFFCXQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 594
+GKP++LLPFFC Q+FDFA GYLCYL+ IH++IAE+ R+P+
Sbjct: 142 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESHRLPW 189
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +2
Query: 83 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELD 238
G+ E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+
Sbjct: 31 GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELE 82
>AF317419-1|AAK69597.1| 432|Drosophila melanogaster
lysosomal-associated transmembraneprotein protein.
Length = 432
Score = 102 bits (245), Expect = 4e-22
Identities = 50/108 (46%), Positives = 71/108 (65%)
Frame = +1
Query: 271 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMIYGA 450
V + LPTPLS VE PY+ + H ++ Y + D+G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMIYGT 145
Query: 451 ARGKPAYLLPFFCXQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 594
+GKP++LLPFFC Q+FDFA GYLCYL+ IH++IAE+ R+P+
Sbjct: 146 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESHRLPW 193
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +2
Query: 83 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELD 238
G+ E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+
Sbjct: 31 GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELE 82
>AE013599-705|AAF59049.3| 432|Drosophila melanogaster CG14767-PC,
isoform C protein.
Length = 432
Score = 102 bits (245), Expect = 4e-22
Identities = 50/108 (46%), Positives = 71/108 (65%)
Frame = +1
Query: 271 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMIYGA 450
V + LPTPLS VE PY+ + H ++ Y + D+G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMIYGT 145
Query: 451 ARGKPAYLLPFFCXQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 594
+GKP++LLPFFC Q+FDFA GYLCYL+ IH++IAE+ R+P+
Sbjct: 146 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESHRLPW 193
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +2
Query: 83 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELD 238
G+ E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+
Sbjct: 31 GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELE 82
>AE013599-704|AAF59050.2| 432|Drosophila melanogaster CG14767-PB,
isoform B protein.
Length = 432
Score = 102 bits (245), Expect = 4e-22
Identities = 50/108 (46%), Positives = 71/108 (65%)
Frame = +1
Query: 271 VGRTGDVLPTPLSNVETRPSPYSQHASHPSDHSLIYHDADVGAMVTVGTMALTLIMIYGA 450
V + LPTPLS VE PY+ + H ++ Y + D+G +V +A+TL+MIYG
Sbjct: 90 VDLSAPALPTPLSKVEP---PYA-YRDHSLNYRKRYQNFDMGGLVCTCMIAITLMMIYGT 145
Query: 451 ARGKPAYLLPFFCXQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 594
+GKP++LLPFFC Q+FDFA GYLCYL+ IH++IAE+ R+P+
Sbjct: 146 IKGKPSHLLPFFCLQLFDFAITTLTAAGYLCYLQAIHSIIAESHRLPW 193
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +2
Query: 83 GSERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELD 238
G+ E+ CCF LHV T T+++G WHLFL+++AL VLA I R+P ++DEL+
Sbjct: 31 GNRHLKEFTCCFGLHVHTATLMIGLWHLFLNILALSVLAVIWRNPEMMDELE 82
>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
variegation protein3-7 protein.
Length = 1169
Score = 29.5 bits (63), Expect = 4.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 392 WVRWLQWVPWL 424
W+RWL+W PWL
Sbjct: 216 WLRWLRWHPWL 226
>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
protein.
Length = 1250
Score = 29.5 bits (63), Expect = 4.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 392 WVRWLQWVPWL 424
W+RWL+W PWL
Sbjct: 297 WLRWLRWHPWL 307
>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
protein.
Length = 1019
Score = 29.1 bits (62), Expect = 6.0
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = -2
Query: 362 SLGCEAC*EYGLGRVSTFDSGVGSTSPVRPTLLHELLGMTHGPVHPAIEDHAQSLLKLLV 183
S C AC + G + F S S + + E + + VH ++ HA + + +
Sbjct: 543 SQACSACHQPG-ATIKCFKSRCNSLYHLPCAIREECVFYKNKSVHCSVHGHAHAGITMGA 601
Query: 182 PLGAGTGAMIPG*LCQSEHVGRSSIATHCHV 90
GA TGA + G + +E SS+ H V
Sbjct: 602 GAGATTGAGLGGSVADNE---LSSLVVHRRV 629
>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
protein.
Length = 2422
Score = 29.1 bits (62), Expect = 6.0
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = -2
Query: 362 SLGCEAC*EYGLGRVSTFDSGVGSTSPVRPTLLHELLGMTHGPVHPAIEDHAQSLLKLLV 183
S C AC + G + F S S + + E + + VH ++ HA + + +
Sbjct: 1946 SQACSACHQPG-ATIKCFKSRCNSLYHLPCAIREECVFYKNKSVHCSVHGHAHAGITMGA 2004
Query: 182 PLGAGTGAMIPG*LCQSEHVGRSSIATHCHV 90
GA TGA + G + +E SS+ H V
Sbjct: 2005 GAGATTGAGLGGSVADNE---LSSLVVHRRV 2032
>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
isoform D protein.
Length = 2431
Score = 29.1 bits (62), Expect = 6.0
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = -2
Query: 362 SLGCEAC*EYGLGRVSTFDSGVGSTSPVRPTLLHELLGMTHGPVHPAIEDHAQSLLKLLV 183
S C AC + G + F S S + + E + + VH ++ HA + + +
Sbjct: 1955 SQACSACHQPG-ATIKCFKSRCNSLYHLPCAIREECVFYKNKSVHCSVHGHAHAGITMGA 2013
Query: 182 PLGAGTGAMIPG*LCQSEHVGRSSIATHCHV 90
GA TGA + G + +E SS+ H V
Sbjct: 2014 GAGATTGAGLGGSVADNE---LSSLVVHRRV 2041
>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
isoform C protein.
Length = 2410
Score = 29.1 bits (62), Expect = 6.0
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = -2
Query: 362 SLGCEAC*EYGLGRVSTFDSGVGSTSPVRPTLLHELLGMTHGPVHPAIEDHAQSLLKLLV 183
S C AC + G + F S S + + E + + VH ++ HA + + +
Sbjct: 1934 SQACSACHQPG-ATIKCFKSRCNSLYHLPCAIREECVFYKNKSVHCSVHGHAHAGITMGA 1992
Query: 182 PLGAGTGAMIPG*LCQSEHVGRSSIATHCHV 90
GA TGA + G + +E SS+ H V
Sbjct: 1993 GAGATTGAGLGGSVADNE---LSSLVVHRRV 2020
>AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p
protein.
Length = 958
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 192 F*QRLCVILDCWMNWTVSHPQEFMEQCGA 278
F R+C ++ W WT+ +P++FM Q A
Sbjct: 590 FKSRVCNVIRTWEEWTI-YPKDFMAQLTA 617
>AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA
protein.
Length = 957
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 192 F*QRLCVILDCWMNWTVSHPQEFMEQCGA 278
F R+C ++ W WT+ +P++FM Q A
Sbjct: 589 FKSRVCNVIRTWEEWTI-YPKDFMAQLTA 616
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,422,822
Number of Sequences: 53049
Number of extensions: 786687
Number of successful extensions: 2700
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2692
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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