Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060340.seq
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.7  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.3  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   8.3  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.3  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 447 CALQSFGIVDASPKFNK-TRRSHNRVINCDSEIKHGXTYAGKRVRTGAHYGQTRL 608
           CA++ F  VD    FN+   R   ++   ++EI    T       T  H   T++
Sbjct: 65  CAMKKFSFVDKDGNFNEHVSREIAKIFLNENEINQLITECSAISDTNVHLKITKI 119


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 226 QNSKPFVRHGVEFYFKNG 279
           +N K   RH + FYF+ G
Sbjct: 2   ENQKEHYRHILLFYFRKG 19


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 447 CALQSFGIVDASPKFNK 497
           C ++ F +VD +  FN+
Sbjct: 65  CTMKKFNVVDENANFNE 81


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 268 FKNGNFMFYLYNSLKFYYY 324
           FKN +F F L  +L F Y+
Sbjct: 2   FKNYHFFFILVITLIFLYF 20


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 639 WAQYNDXSKLTNAFARNVHRF 577
           WA Y D S + +A+   + +F
Sbjct: 116 WANYKDCSGIVSAYKIAIDKF 136


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 639 WAQYNDXSKLTNAFARNVHRF 577
           WA Y D S + +A+   + +F
Sbjct: 116 WANYKDCSGIVSAYKIAIDKF 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,452
Number of Sequences: 438
Number of extensions: 3981
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)