Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060339.seq
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein. 50 6e-06
BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein. 50 6e-06
BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein. 50 6e-06
AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated tra... 50 6e-06
AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated tr... 50 6e-06
AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens ... 50 6e-06
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 50 6e-06
AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated tr... 50 6e-06
AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated tr... 50 6e-06
D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein. 46 2e-04
CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein. 46 2e-04
BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated pr... 46 2e-04
BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated pr... 46 2e-04
BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated pr... 46 2e-04
AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein. 46 2e-04
AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein. 41 0.004
AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated pro... 40 0.006
AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated pro... 40 0.006
AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein. 40 0.006
AY464186-1|AAS46603.1| 281|Homo sapiens complement inhibitory r... 38 0.044
AC079145-1|AAX88938.1| 196|Homo sapiens unknown protein. 37 0.077
AK095698-1|BAC04613.1| 242|Homo sapiens protein ( Homo sapiens ... 32 1.7
AC093642-1|AAY15000.1| 242|Homo sapiens unknown protein. 32 1.7
DQ181928-1|ABA19229.1| 540|Homo sapiens CARDIF protein. 31 3.8
DQ174270-1|AAZ80417.1| 540|Homo sapiens mitochondrial anti-vira... 31 3.8
BC044952-1|AAH44952.1| 540|Homo sapiens virus-induced signaling... 31 3.8
AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein. 31 3.8
AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein. 31 3.8
AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein ... 31 3.8
U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated mult... 30 6.7
U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein. 30 6.7
D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein. 30 6.7
DQ167126-1|ABA54890.1| 540|Homo sapiens virus-induced signaling... 30 6.7
BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated mu... 30 6.7
BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated mu... 30 6.7
AL353194-3|CAI11041.1| 540|Homo sapiens novel protein protein. 30 6.7
AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated mu... 30 6.7
AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated mu... 30 6.7
AL109804-18|CAI18851.1| 540|Homo sapiens novel protein protein. 30 6.7
AB232371-1|BAE79738.1| 540|Homo sapiens Ips-1 protein. 30 6.7
AB097003-1|BAC77356.1| 540|Homo sapiens putative NFkB activatin... 30 6.7
AB033097-1|BAA86585.1| 542|Homo sapiens KIAA1271 protein protein. 30 6.7
>BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein.
Length = 317
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 182 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 234
>BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 143
>BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 143
>AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated
transmembrane protein 4 beta protein.
Length = 370
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 159 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 194
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 235 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 287
>AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta, variant 1 protein.
Length = 317
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 182 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 234
>AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens
cDNA PSEC0001 fis, clone NT2RM1000066, moderately
similar to Lysosomal-associated transmembrane protein 4
beta. ).
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 143
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 72 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 107
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 148 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 200
>AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta variant 2 protein.
Length = 317
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 182 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 234
>AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated
transmembrane protein 4 beta protein.
Length = 226
Score = 50.4 bits (115), Expect = 6e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
Score = 38.7 bits (86), Expect = 0.019
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 440 YGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVP--FPRR 601
YGA + + A+++PFFC QIFDFA + L Y I I R++P FP R
Sbjct: 91 YGAYKQRAAWIIPFFCYQIFDFALNMLVAITVLIYPNSIQEYI---RQLPPNFPYR 143
>D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein.
Length = 254
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 114 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
S+R CC C HVRTGTIILG+W++ ++L+ +L V P
Sbjct: 32 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHP 75
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 592
++ +++YGA + +L+PFFC ++FDF + L YL +I + + P+
Sbjct: 114 ISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPY 170
>CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein.
Length = 233
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 114 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
S+R CC C HVRTGTIILG+W++ ++L+ +L V P
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHP 54
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 592
++ +++YGA + +L+PFFC ++FDF + L YL +I + + P+
Sbjct: 93 ISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPY 149
>BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 114 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
S+R CC C HVRTGTIILG+W++ ++L+ +L V P
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHP 54
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 592
++ +++YGA + +L+PFFC ++FDF + L YL +I + + P+
Sbjct: 93 ISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPY 149
>BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 114 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
S+R CC C HVRTGTIILG+W++ ++L+ +L V P
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHP 54
Score = 35.5 bits (78), Expect = 0.18
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 592
++ +++YG+ + +L+PFFC ++FDF + L YL +I + + P+
Sbjct: 93 ISSMLVYGSISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPY 149
>BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 114 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
S+R CC C HVRTGTIILG+W++ ++L+ +L V P
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHP 54
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 592
++ +++YGA + +L+PFFC ++FDF + L YL +I + + P+
Sbjct: 93 ISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPY 149
>AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein.
Length = 215
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 114 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 245
S+R CC C HVRTGTIILG+W++ ++L+ +L V P
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHP 54
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 592
++ +++YGA + +L+PFFC ++FDF + L YL +I + + P+
Sbjct: 93 ISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPY 149
>AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein.
Length = 38
Score = 41.1 bits (92), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 114 SERGSEWLCCFCLHVRTGTIILGSWHL 194
S+R CC C HVRTGTIILG+W++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYM 37
>AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHL 194
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHL 194
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 138 CCFCLHVRTGTIILGSWHL 194
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY464186-1|AAS46603.1| 281|Homo sapiens complement inhibitory
receptor protein.
Length = 281
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 413 TMALTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALI 568
++A M++GA +P +LLPFF +Q+FD LG++ + +I
Sbjct: 36 SLAFCCFMVHGAITKQPTHLLPFFFIQVFDLTICLIHILGFMSSTSDLRLMI 87
>AC079145-1|AAX88938.1| 196|Homo sapiens unknown protein.
Length = 196
Score = 36.7 bits (81), Expect = 0.077
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDFASPF*RQLGYLCYLRQIHALIAETRRVPF 592
++ +++YGA + +L+PFFC ++FDF + L YL +I + + P+
Sbjct: 56 ISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPY 112
>AK095698-1|BAC04613.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ38379 fis, clone FEBRA2002986. ).
Length = 242
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 225 AAIVRDPRLLMNWTVSHPQ*V-HGAMWGALEMYCPHHCQMWKLVPAHTLNML 377
+A+ PR W H Q H WG L CP HC W + H+ N+L
Sbjct: 162 SALTECPRHCPPWGRLHSQCPRHCPPWGRLHSQCPRHCPPWGRL--HSQNVL 211
>AC093642-1|AAY15000.1| 242|Homo sapiens unknown protein.
Length = 242
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 225 AAIVRDPRLLMNWTVSHPQ*V-HGAMWGALEMYCPHHCQMWKLVPAHTLNML 377
+A+ PR W H Q H WG L CP HC W + H+ N+L
Sbjct: 162 SALTECPRHCPPWGRLHSQCPRHCPPWGRLHSQCPRHCPPWGRL--HSQNVL 211
>DQ181928-1|ABA19229.1| 540|Homo sapiens CARDIF protein.
Length = 540
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSFENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>DQ174270-1|AAZ80417.1| 540|Homo sapiens mitochondrial anti-viral
signaling protein protein.
Length = 540
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSFENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>BC044952-1|AAH44952.1| 540|Homo sapiens virus-induced signaling
adapter protein.
Length = 540
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSFENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>AL139100-5|CAI20353.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 31.1 bits (67), Expect = 3.8
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +2
Query: 170 NYPGIMAPVPAPSGTRSFSSDCA*SSIA---DELDRESSPVSSWSNVGRTGDVLPTPLSN 340
++ G+ P S SD + S + E ES P S SNV V +PL N
Sbjct: 1106 SFDGVSLDSSGPEDRISVDSDGSDSFVMLLESESGPESVPPGSLSNVSDNAGVQGSPLVN 1165
Query: 341 VETRPSPYSQHASHPSDHSLIYLGTMALTL 430
+ SP + + PS LI+ L L
Sbjct: 1166 NYGQGSPAANSSVSPSGEDLIFHPVSVLVL 1195
>AL033520-3|CAI20282.1| 1440|Homo sapiens RP3-349A12.1 protein.
Length = 1440
Score = 31.1 bits (67), Expect = 3.8
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +2
Query: 170 NYPGIMAPVPAPSGTRSFSSDCA*SSIA---DELDRESSPVSSWSNVGRTGDVLPTPLSN 340
++ G+ P S SD + S + E ES P S SNV V +PL N
Sbjct: 1106 SFDGVSLDSSGPEDRISVDSDGSDSFVMLLESESGPESVPPGSLSNVSDNAGVQGSPLVN 1165
Query: 341 VETRPSPYSQHASHPSDHSLIYLGTMALTL 430
+ SP + + PS LI+ L L
Sbjct: 1166 NYGQGSPAANSSVSPSGEDLIFHPVSVLVL 1195
>AB126777-1|BAD32740.1| 1440|Homo sapiens ICBP90 binding protein 1
protein.
Length = 1440
Score = 31.1 bits (67), Expect = 3.8
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +2
Query: 170 NYPGIMAPVPAPSGTRSFSSDCA*SSIA---DELDRESSPVSSWSNVGRTGDVLPTPLSN 340
++ G+ P S SD + S + E ES P S SNV V +PL N
Sbjct: 1106 SFDGVSLDSSGPEDRISVDSDGSDSFVMLLESESGPESVPPGSLSNVSDNAGVQGSPLVN 1165
Query: 341 VETRPSPYSQHASHPSDHSLIYLGTMALTL 430
+ SP + + PS LI+ L L
Sbjct: 1166 NYGQGSPAANSSVSPSGEDLIFHPVSVLVL 1195
>U51240-1|AAB08975.1| 262|Homo sapiens lysosomal-associated
multitransmembrane protein protein.
Length = 262
Score = 30.3 bits (65), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDF 505
++L ++ G + + YLLPF LQI D+
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDY 103
>U30498-1|AAA74018.1| 262|Homo sapiens E3 protein protein.
Length = 262
Score = 30.3 bits (65), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDF 505
++L ++ G + + YLLPF LQI D+
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDY 103
>D42042-1|BAA07643.1| 269|Homo sapiens KIAA0085 protein.
Length = 269
Score = 30.3 bits (65), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDF 505
++L ++ G + + YLLPF LQI D+
Sbjct: 83 ISLSLLIGVVKNREKYLLPFLSLQIMDY 110
>DQ167126-1|ABA54890.1| 540|Homo sapiens virus-induced signaling
adapter protein.
Length = 540
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>BC106897-1|AAI06898.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDF 505
++L ++ G + + YLLPF LQI D+
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDY 103
>BC106896-1|AAI06897.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDF 505
++L ++ G + + YLLPF LQI D+
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDY 103
>AL353194-3|CAI11041.1| 540|Homo sapiens novel protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>AL137857-1|CAI19321.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDF 505
++L ++ G + + YLLPF LQI D+
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDY 103
>AL137027-1|CAI19267.1| 262|Homo sapiens lysosomal associated
multispanning membrane protein 5 protein.
Length = 262
Score = 30.3 bits (65), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 422 LTLIMIYGAARGKPAYLLPFFCLQIFDF 505
++L ++ G + + YLLPF LQI D+
Sbjct: 76 ISLSLLIGVVKNREKYLLPFLSLQIMDY 103
>AL109804-18|CAI18851.1| 540|Homo sapiens novel protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>AB232371-1|BAE79738.1| 540|Homo sapiens Ips-1 protein.
Length = 540
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>AB097003-1|BAC77356.1| 540|Homo sapiens putative NFkB activating
protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 383 SRNEETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 442
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 443 ASTSLGMGPCHGP-EENEYKSEGT 465
>AB033097-1|BAA86585.1| 542|Homo sapiens KIAA1271 protein protein.
Length = 542
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 652 SRDDDERRGPTPAARSNSSRKGNATGLRNQGM--DLTQVTQIA-QLPSKW*GKVEDLKTE 482
SR+++ PTPA + S + N+G+ +L++ +A Q+ S + G EDL
Sbjct: 385 SRNEETPAAPTPAGATGGSSAWLDSSSENRGLGSELSKPGVLASQVDSPFSGCFEDLAIS 444
Query: 481 EGQQISRFPTSGAVDHNQCESHGT 410
+ P G + N+ +S GT
Sbjct: 445 ASTSLGMGPCHGP-EENEYKSEGT 467
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,717,184
Number of Sequences: 237096
Number of extensions: 2905461
Number of successful extensions: 6921
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 6459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6919
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -