Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060339.seq
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.6  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.8  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   6.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   6.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   6.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   6.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   6.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   6.3  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   8.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 170 NYPGIMAPVPAPSGTRSFSSDCA*SSIADE 259
           +YPG  +  P+PS   SF S  + +S+  E
Sbjct: 82  SYPGGGSSSPSPSSPSSFFSSVSPTSLGSE 111


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 450 LVGNRLICCPSSVFRSSTLPHHFDGN 527
           + GNRLI   SSV  ++   H +DG+
Sbjct: 175 IFGNRLIEESSSVMEAAYSCHWYDGS 200


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +3

Query: 309 LEMYCPHHCQMWKLVPAHTLNMLHILVTTA*YTWVP 416
           L MY P    M K +  +T N   I +      W+P
Sbjct: 364 LRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIP 399


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 413 YPGILGCGH 387
           YPG L CGH
Sbjct: 31  YPGTLWCGH 39


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 413 YPGILGCGH 387
           YPG L CGH
Sbjct: 36  YPGTLWCGH 44


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 608 QQLFAERERDGSPQSRHGFDASNT 537
           ++  ++R +  SP+SR   +ASNT
Sbjct: 70  EKKLSKRSKSRSPESRGRSNASNT 93


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 413 YPGILGCGH 387
           YPG L CGH
Sbjct: 36  YPGTLWCGH 44


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 542 YLRQIHALIAETRRVPFPRRVAAGCRRRPSPFVVISALIVGRDNLK 679
           + + ++  +AET R+ +   V AG  +  +    I   +VG  +LK
Sbjct: 191 FSKNVNQTVAETVRIIYGGSVTAGNAKDLAKEKDIDGFLVGGASLK 236


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 516 FDGNWAICV-TCVKSMP*LRRPVAFPFREE 602
           F+ N  + + T VKS+P  ++ V F FR++
Sbjct: 146 FNTNTEVVINTEVKSIPVTKKGVYFAFRDQ 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,582
Number of Sequences: 438
Number of extensions: 4777
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)