Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060338.seq
(647 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061412-1|AAL28960.1| 342|Drosophila melanogaster LD34388p pro... 58 1e-08
AE014134-853|AAN10522.1| 342|Drosophila melanogaster CG31650-PC... 58 1e-08
AE014134-852|AAF52207.1| 342|Drosophila melanogaster CG31650-PB... 58 1e-08
AE014134-851|AAN10521.1| 342|Drosophila melanogaster CG31650-PA... 58 1e-08
BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p pro... 50 4e-06
AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p pro... 50 4e-06
AE014296-216|AAN11468.1| 192|Drosophila melanogaster CG9148-PB,... 50 4e-06
AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,... 50 4e-06
AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,... 50 4e-06
AB011261-1|BAA34049.1| 193|Drosophila melanogaster supercoiling... 48 1e-05
>AY061412-1|AAL28960.1| 342|Drosophila melanogaster LD34388p
protein.
Length = 342
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 10 EEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASDAARDLLG-EHFDDXL 162
+EV+HLF S D+DHDD LS+ E+L ++D FVGSEA+D L H D L
Sbjct: 291 DEVDHLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHLQNINHLSDEL 342
>AE014134-853|AAN10522.1| 342|Drosophila melanogaster CG31650-PC,
isoform C protein.
Length = 342
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 10 EEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASDAARDLLG-EHFDDXL 162
+EV+HLF S D+DHDD LS+ E+L ++D FVGSEA+D L H D L
Sbjct: 291 DEVDHLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHLQNINHLSDEL 342
>AE014134-852|AAF52207.1| 342|Drosophila melanogaster CG31650-PB,
isoform B protein.
Length = 342
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 10 EEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASDAARDLLG-EHFDDXL 162
+EV+HLF S D+DHDD LS+ E+L ++D FVGSEA+D L H D L
Sbjct: 291 DEVDHLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHLQNINHLSDEL 342
>AE014134-851|AAN10521.1| 342|Drosophila melanogaster CG31650-PA,
isoform A protein.
Length = 342
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +1
Query: 10 EEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASDAARDLLG-EHFDDXL 162
+EV+HLF S D+DHDD LS+ E+L ++D FVGSEA+D L H D L
Sbjct: 291 DEVDHLFVSTDEDHDDRLSYLEILNNYDTFVGSEATDYGDHLQNINHLSDEL 342
>BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p
protein.
Length = 329
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 7 EEEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASD 120
E E +HL AD DHDD L+ EE+L +DVFVGS+A+D
Sbjct: 281 EAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATD 318
>AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p
protein.
Length = 329
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 7 EEEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASD 120
E E +HL AD DHDD L+ EE+L +DVFVGS+A+D
Sbjct: 281 EAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATD 318
>AE014296-216|AAN11468.1| 192|Drosophila melanogaster CG9148-PB,
isoform B protein.
Length = 192
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 7 EEEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASD 120
E E +HL AD DHDD L+ EE+L +DVFVGS+A+D
Sbjct: 144 EAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATD 181
>AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,
isoform C protein.
Length = 329
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 7 EEEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASD 120
E E +HL AD DHDD L+ EE+L +DVFVGS+A+D
Sbjct: 281 EAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATD 318
>AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,
isoform A protein.
Length = 329
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 7 EEEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASD 120
E E +HL AD DHDD L+ EE+L +DVFVGS+A+D
Sbjct: 281 EAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQATD 318
>AB011261-1|BAA34049.1| 193|Drosophila melanogaster supercoiling
factor protein.
Length = 193
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +1
Query: 7 EEEVEHLFASADDDHDDVLSFEEVLRHHDVFVGSEASD 120
E E +HL AD DHDD L+ EE+L +DVFVGS+ +D
Sbjct: 145 EAEAKHLLFEADADHDDKLTKEEILDKYDVFVGSQTTD 182
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,194,948
Number of Sequences: 53049
Number of extensions: 366324
Number of successful extensions: 824
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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