Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060336.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047560-1|AAK77292.1|  524|Drosophila melanogaster GH07444p pro...    49   5e-06
AE014296-809|AAF47872.1|  524|Drosophila melanogaster CG1309-PA ...    49   5e-06

>AY047560-1|AAK77292.1|  524|Drosophila melanogaster GH07444p
           protein.
          Length = 524

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +1

Query: 262 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 441
           +GYY +PL+  ++ +RG+L  + + TL +    +G I  +  VMR  GR  S  Y   I 
Sbjct: 49  VGYYTSPLLVTFLYRRGYLVTDSIPTLAKITTSVGLIVILSLVMRGLGRKQSRSYSNMIK 108

Query: 442 TL 447
            L
Sbjct: 109 AL 110


>AE014296-809|AAF47872.1|  524|Drosophila melanogaster CG1309-PA
           protein.
          Length = 524

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +1

Query: 262 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 441
           +GYY +PL+  ++ +RG+L  + + TL +    +G I  +  VMR  GR  S  Y   I 
Sbjct: 49  VGYYTSPLLVTFLYRRGYLVTDSIPTLAKITTSVGLIVILSLVMRGLGRKQSRSYSNMIK 108

Query: 442 TL 447
            L
Sbjct: 109 AL 110


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,133,698
Number of Sequences: 53049
Number of extensions: 671447
Number of successful extensions: 1606
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)