Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060335.seq
(665 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to p... 46 3e-05
At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to p... 43 2e-04
At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to S... 42 4e-04
At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identic... 42 5e-04
At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / aller... 40 0.002
At1g16900.1 68414.m02047 curculin-like (mannose-binding) lectin ... 27 8.5
>At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to
profilin 4 SP:Q38905 GI:1353768 from [Arabidopsis
thaliana]
Length = 134
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 325 GKVGVHCXKTQQAVVISLYEEPIQPQQXASVVEKLGXYLITCG 453
G G+ KT Q++V LYEEP+ P Q VVE+LG YLI G
Sbjct: 91 GAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLIEQG 133
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Frame = +3
Query: 81 MSWQDYVDKQLMAS------RCVTKAAIAGHDXNVWAKSEGF 188
MSWQ YVD+ LM +T AAI GHD +VWA+S F
Sbjct: 1 MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANF 42
>At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to
profilin 3 SP:Q38904 GI:1353765 from [Arabidopsis
thaliana]
Length = 134
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 325 GKVGVHCXKTQQAVVISLYEEPIQPQQXASVVEKLGXYLITCG 453
G G+ KT Q+ V +YEEP+ P Q VVE+LG YL+ G
Sbjct: 91 GAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLLEQG 133
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Frame = +3
Query: 81 MSWQDYVDKQLMAS------RCVTKAAIAGHDXNVWAKSEGF 188
MSWQ YVD+ LM +T AAI GHD +VWA+S F
Sbjct: 1 MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANF 42
>At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to
SP|Q9FE63 Profilin 5 {Arabidopsis thaliana}
Length = 168
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +1
Query: 325 GKVGVHCXKTQQAVVISLYEEPIQPQQXASVVEKLGXYLITCG 453
G GV KT A+V +Y+EP+ P Q VVE LG YLI G
Sbjct: 125 GAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESG 167
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +3
Query: 81 MSWQDYVDKQLM---ASRCVTKAAIAGHDXNVWAKSEGF 188
MSWQ YVD LM A +T AAI G D +VWA+S F
Sbjct: 38 MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNF 76
>At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identical
to profilin 2 SP:Q42418 GI:1353772 from [Arabidopsis
thaliana]; identical to cDNA profilin (PRF2) GI:9965570
Length = 131
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 325 GKVGVHCXKTQQAVVISLYEEPIQPQQXASVVEKLGXYLITCG 453
G GV KT QA+V +Y+EP+ Q VVE+LG YLI G
Sbjct: 88 GPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESG 130
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 81 MSWQDYVDKQLMAS---RCVTKAAIAGHDXNVWAKSEGF-XISKDXVAKIVAGFE 233
MSWQ YVD LM +T AAI G D +VWA+S F + +A I FE
Sbjct: 1 MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFE 55
>At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / allergen
Ara t 8 identical to profilin 1 (Allergen Ara t 8)
SP:Q42449 GI:1353770 from [Arabidopsis thaliana]
Length = 131
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 81 MSWQDYVDKQLMAS---RCVTKAAIAGHDXNVWAKSEGF-XISKDXVAKIVAGFENXSLL 248
MSWQ YVD LM +T AAI G D +VWA+S F + + I FE L
Sbjct: 1 MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +1
Query: 325 GKVGVHCXKTQQAVVISLYEEPIQPQQXASVVEKLGXYLI 444
G GV KT QA+V Y+EP+ Q VVE+LG YLI
Sbjct: 88 GPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLI 127
>At1g16900.1 68414.m02047 curculin-like (mannose-binding) lectin
family protein very low similarity to Ser Thr protein
kinase GI:2598067 from (Zea mays); contains Pfam lectin
(probable mannose binding) domain PF01453
Length = 919
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 329 LPXSRG*YGLCX*GRCTACPL 267
LP G +G+C +C ACPL
Sbjct: 279 LPSKCGAFGICEDNQCVACPL 299
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,893,060
Number of Sequences: 28952
Number of extensions: 193150
Number of successful extensions: 303
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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