Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060334.seq
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 123 1e-28
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 121 6e-28
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 110 9e-25
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 44 2e-04
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 43 3e-04
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 41 0.001
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 40 0.001
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 40 0.001
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 40 0.002
08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736 40 0.002
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 39 0.003
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 38 0.006
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 38 0.007
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 37 0.013
09_04_0652 - 19227686-19227926,19229368-19232294 37 0.017
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 36 0.030
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 35 0.053
01_06_0864 - 32546696-32546803,32546881-32546961,32547134-325472... 35 0.053
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 35 0.070
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 35 0.070
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381... 34 0.092
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 34 0.12
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 34 0.12
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 33 0.21
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 33 0.21
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 33 0.21
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 33 0.28
04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632 32 0.49
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 31 0.86
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 29 4.6
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324... 29 4.6
01_03_0038 + 11862743-11862884,11863145-11863704,11863733-118637... 28 8.0
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 123 bits (297), Expect = 1e-28
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRT---KETLLTCLADLF 423
P E YFGL NFGNTCY NSVLQALYFC PFRE++LEY A NK T ++ +LTCLADLF
Sbjct: 17 PEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLTCLADLF 76
Query: 424 YSIATQKKKVGSIAPKKFIARLRKEKE 504
I+ QKKK G IAPK+FI RL+K+ E
Sbjct: 77 SQISNQKKKTGVIAPKRFIQRLKKQNE 103
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 7/53 (13%)
Frame = +3
Query: 513 NYMQQDAHEFLNFLINHINEI------ILAERNQSTLKVQKNNSGE-NVTCNG 650
+YM QDAHEFLNFL+N + +I ++AE +++ ++KN++G NV NG
Sbjct: 107 SYMHQDAHEFLNFLLNELVDILEKESKVVAEPCENS-SLKKNSNGPINVQLNG 158
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 121 bits (291), Expect = 6e-28
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKR---TKETLLTCLADLF 423
P E YFGL NFGNTCY NSVLQALYFC PFREK+LEY A NK +E LLTCLADLF
Sbjct: 17 PEGERYFGLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKTPGDAEENLLTCLADLF 76
Query: 424 YSIATQKKKVGSIAPKKFIARLRKEKE 504
++ KKK G IAPK+F+ R++K+ E
Sbjct: 77 MQVSQSKKKTGVIAPKRFVQRVKKQNE 103
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 513 NYMQQDAHEFLNFLINHINEIILAERN 593
+YM QDAHEFLNFL+N + +I+ E N
Sbjct: 107 SYMHQDAHEFLNFLLNELVDILEKESN 133
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 110 bits (265), Expect = 9e-25
Identities = 52/87 (59%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKET---LLTCLADLF 423
P YFGL NFGNTCY NSVLQALY C PFRE++LEY A K T+++ LLTCLADLF
Sbjct: 66 PEGARYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLTCLADLF 125
Query: 424 YSIATQKKKVGSIAPKKFIARLRKEKE 504
I KK+ G +APK+F+ R+RK+ E
Sbjct: 126 SQITLAKKRTGVLAPKRFVQRVRKQNE 152
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 513 NYMQQDAHEFLNFLINHINEII-----LAERNQSTLKVQKNNSGENVTCNG 650
+YM QDAHEF NFL+N I +I+ A + T + +N N NG
Sbjct: 156 SYMHQDAHEFWNFLVNDIIDILEEDCRTANSSPETTPEEVSNGAANALANG 206
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 FGLVNFGNTCYSNSVLQALYFCRPFREKVL-EYKAKNKRTKETLLTC 408
FGL N GN+CY+N+VLQ L F RP +L +KN KE C
Sbjct: 450 FGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMC 496
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 271 FGLVNFGNTCYSNSVLQALYFCRPFREKVLE 363
FGLVN GN+CY+N+VLQ L F RP + E
Sbjct: 379 FGLVNLGNSCYANAVLQCLAFTRPLTAYLTE 409
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPF 345
GL NFGNTCY NSVLQ L + PF
Sbjct: 139 GLQNFGNTCYLNSVLQCLTYTEPF 162
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 268 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEY-KAKNKRTKETLLTCLADLFYSIATQK 444
Y GL N G TCY NS+LQ LY FR+ V +N ++ L LFY +
Sbjct: 188 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 247
Query: 445 KKVGS 459
V +
Sbjct: 248 NSVAT 252
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 268 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEY-KAKNKRTKETLLTCLADLFYSIATQK 444
Y GL N G TCY NS+LQ LY FR+ V +N ++ L LFY +
Sbjct: 198 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Query: 445 KKVGS 459
V +
Sbjct: 258 NSVAT 262
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKET 396
GL N GNTCY NSVLQ L + PF + K K+ E+
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSLPSES 141
>08_02_1336 - 26233081-26233312,26233814-26234672,26235218-26236736
Length = 869
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 453
G+ N GNTCY N++LQ L+ R ++L A + + + L +LF + +
Sbjct: 304 GIPNLGNTCYVNALLQCLFVLEKLRARMLASDAPS----GFVGSALKELFQEVNSVNNAQ 359
Query: 454 GSIAPKKFIARLR 492
+ P KF+ R+R
Sbjct: 360 RPLNPTKFLDRVR 372
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +1
Query: 265 HYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEY--KAKNKRTKETLLTCLADLFYSIAT 438
H GL N GNTCY NS LQ L+ + +L Y + + +
Sbjct: 102 HSAGLYNLGNTCYMNSTLQCLHSVPELKSALLSYSDNVRGNGVDQASHNLTVATRNTFGE 161
Query: 439 QKKKVGSIAPKKFIARLRKEKEELTITCNKMPM 537
+ V +AP F+ LRK+ + N + M
Sbjct: 162 LDQSVRPVAPLLFLQTLRKKYPQFAQQQNNVYM 194
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 232 RYRVRAVPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFR-EKVLEYKAKNKRTKETLLTC 408
+Y VR + P GL N GN+CY+N+VLQ L +P +L +K+ TK T
Sbjct: 344 QYEVRGISPR----GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCNTKTQAPTL 399
Query: 409 LADLFYSI 432
L + S+
Sbjct: 400 LGVVVKSL 407
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 453
GL N G TCY+NS+LQ LY FR + + + +L LA LF + + K
Sbjct: 128 GLTNLGATCYANSILQCLYMNTSFRLGIFSLEPDILK-MHPVLDQLARLFAQLHSSKMAF 186
Query: 454 GSIAP 468
AP
Sbjct: 187 IDSAP 191
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/82 (30%), Positives = 37/82 (45%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 453
G+ N GNTCY NS++Q L R ++L + + T L T L LF +
Sbjct: 302 GITNLGNTCYLNSLVQCLLALGRLRARML----RPEDTTGRLGTVLRYLFQDTDSVNNSG 357
Query: 454 GSIAPKKFIARLRKEKEELTIT 519
G + P + R+R E +T
Sbjct: 358 GLLNPSGLLRRVRMFVPESQVT 379
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 453
GL N GNTC+ N+V+Q+L R K+L LL L LF +
Sbjct: 226 GLPNLGNTCFFNAVMQSLLALDRLRSKMLGPDVPT----GALLMSLKKLFMETSASNDVG 281
Query: 454 GSIAPKKFIARL 489
G+++PK + +
Sbjct: 282 GALSPKNLFSNI 293
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTC-LADLFYSIATQKKK 450
GL+N GN+C++N VLQ L RP +L + K C L +L I +
Sbjct: 205 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRASES 264
Query: 451 VGSIAPKKFIARL 489
+ APK ++ L
Sbjct: 265 MHPFAPKNILSHL 277
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 35.1 bits (77), Expect = 0.053
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLF 423
G+ N GNTCY NS++Q L R ++L A + TL T L DLF
Sbjct: 299 GIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPS----GTLGTALHDLF 344
>01_06_0864 -
32546696-32546803,32546881-32546961,32547134-32547250,
32548264-32548338,32548618-32548680,32549122-32549187,
32549254-32549325,32549403-32549504,32549588-32549765,
32549871-32549926,32551578-32551688,32551797-32551865,
32551960-32552068,32552176-32552327,32552398-32552475,
32554257-32554379,32555527-32555646,32555729-32555809,
32555881-32556027,32556112-32556190,32557223-32557297,
32558004-32558113,32558984-32559082,32559700-32559815,
32559914-32560022,32560098-32560229,32560389-32560591,
32561428-32561585,32561668-32561797,32562529-32562607,
32562806-32562829
Length = 1073
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 268 YFGLVNFGNTCYSNSVLQALYFCRPFRE 351
Y GL N G TCY NS+LQ LY FR+
Sbjct: 171 YVGLKNQGATCYMNSLLQTLYHIPYFRK 198
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 34.7 bits (76), Expect = 0.070
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 453
G+ N GNTCY N++LQ L+ R ++L A + L L +LF +
Sbjct: 341 GMPNLGNTCYINALLQCLFVLGKLRARMLAPDAPS----YILGYELKELFQEVNNVDNAQ 396
Query: 454 GSIAPKKFIARLR 492
+ P KF A +R
Sbjct: 397 LQLNPTKFFACIR 409
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN 378
GL N GN C+ NS LQAL C PF + + + +N
Sbjct: 317 GLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQN 351
>10_01_0345 -
3811057-3811236,3811342-3811615,3811732-3812289,
3812602-3812747,3812930-3813097,3813896-3814003,
3814859-3815029,3816557-3816949,3817522-3817617,
3817715-3817774,3818600-3818744,3819296-3819520,
3820106-3820254
Length = 890
Score = 34.3 bits (75), Expect = 0.092
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVL-----EYKAKNKRTKETLLTCLADLFYSIAT 438
GL N GNTC+ NS +Q+L P E L E +N + LL L D +
Sbjct: 312 GLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQELLAFLLDGLHEDLN 371
Query: 439 QKKKVGSIAPKKFIARLRKEKEE 507
+ KK I K R +E E
Sbjct: 372 RVKKKPYIEAKDADGRPDEELAE 394
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 453
G+ N GNTCY NS+LQ L R +L A L + L LF +
Sbjct: 245 GIPNLGNTCYLNSLLQCLLVLGRLRAGILGLDA----PLGLLGSSLRSLFDDADSVNNAG 300
Query: 454 GSIAPKKFIARLR 492
G + P+K +A +R
Sbjct: 301 GLLDPEKLLACVR 313
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKV 357
G+ NFGNTCY N+VLQ L R ++
Sbjct: 206 GIPNFGNTCYLNAVLQCLLVLGKLRARM 233
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALY----FCRPFRE 351
GL+N GNTC+ NS +Q L F R FRE
Sbjct: 350 GLLNLGNTCFMNSAIQCLVHTPEFARYFRE 379
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVL 360
G++N GNTCY NS++Q L R ++L
Sbjct: 194 GILNLGNTCYLNSLVQCLLVLGKLRARML 222
>03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 298 CYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTC-LADLFYSIATQKKKVG-SIAPK 471
C+ N ++Q+L+ + FR+ L+ + +K ++ C L D+F ++ ++ G ++AP
Sbjct: 1284 CFLNVIIQSLWHLKRFRDGFLKTSSLHKHVEDPCAVCALYDIFTDLSKASEEQGEAVAPT 1343
Query: 472 KFIARLRK 495
L K
Sbjct: 1344 SLRIALSK 1351
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVL 360
G+ N GNTCY N++LQ L R ++L
Sbjct: 570 GMPNLGNTCYLNALLQCLLVLGKLRARIL 598
>04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632
Length = 312
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3
Query: 513 NYMQQDAHEFLNFLINHINEIILAERNQS 599
+Y QQDAHEF +++HI+E I ++++S
Sbjct: 27 SYEQQDAHEFFISILDHIHENIKDDQHKS 55
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPF 345
GL N GN C+ N +LQAL C F
Sbjct: 629 GLKNLGNNCFLNVILQALASCDGF 652
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQAL 327
GL N GNTC+ NS +Q L
Sbjct: 272 GLDNLGNTCFMNSAVQCL 289
>07_01_0426 +
3239274-3239386,3239472-3239702,3242516-3242642,
3242729-3242788,3242868-3242960,3243073-3243369,
3243450-3243761,3243857-3244114,3244227-3244375,
3244470-3245102,3245367-3245640,3245736-3245777,
3246332-3246586,3246700-3246711
Length = 951
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQAL 327
GL N GNTC+ NS +Q L
Sbjct: 263 GLENLGNTCFMNSSIQCL 280
>01_03_0038 +
11862743-11862884,11863145-11863704,11863733-11863777,
11864174-11864563
Length = 378
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1
Query: 295 TCYSNSVLQALYFCRPFREKVLEY 366
TC SNSVLQ L+FC F E Y
Sbjct: 279 TC-SNSVLQILHFCLEFEEGCYVY 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,695,785
Number of Sequences: 37544
Number of extensions: 312412
Number of successful extensions: 716
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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