Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060334.seq
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8927| Best HMM Match : UCH (HMM E-Value=0) 149 2e-36
SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18) 38 0.010
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 37 0.018
SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25) 36 0.031
SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 36 0.031
SB_21866| Best HMM Match : UCH (HMM E-Value=0) 36 0.041
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022) 35 0.071
SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06) 35 0.071
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07) 30 1.5
SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14) 29 3.5
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09) 28 6.2
SB_52862| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_8927| Best HMM Match : UCH (HMM E-Value=0)
Length = 316
Score = 149 bits (361), Expect = 2e-36
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = +1
Query: 253 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSI 432
PPNEH+FGLVNFGNTCY NSVLQAL+FCRPFR+KVL YK +KR KETLLTCLADLF +I
Sbjct: 17 PPNEHFFGLVNFGNTCYCNSVLQALFFCRPFRDKVLSYKPPSKR-KETLLTCLADLFNNI 75
Query: 433 ATQKKKVGSIAPKKFIARLRKEKE 504
A+QKKKVG IAPKKF+ARLRKE E
Sbjct: 76 ASQKKKVGVIAPKKFVARLRKENE 99
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 510 DNYMQQDAHEFLNFLINHINEII 578
DNYMQQDAHEFLN+L+N I +++
Sbjct: 102 DNYMQQDAHEFLNYLLNTIADLL 124
>SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 268 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSI 432
Y GL N G TCY NS+LQ LYF R+ V + +N +++ L +FY +
Sbjct: 280 YVGLKNQGATCYMNSLLQTLYFTCALRKAVYQMPTENDDLGKSVAFALQRVFYEL 334
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALY 330
GLVN GNTCY NSVLQ+LY
Sbjct: 404 GLVNLGNTCYMNSVLQSLY 422
>SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 268 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIAT--- 438
+ GL N G TCY NSVLQ LY RE+V + + ++ L +FY I +
Sbjct: 4 FVGLKNAGATCYMNSVLQQLYMQPGIRERVSPDPSPVCWLPDIVVGFLGSVFYQIQSLFG 63
Query: 439 --QKKKVGSIAPKKF 477
K+ AP++F
Sbjct: 64 HLMDSKLQYFAPEQF 78
>SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18)
Length = 457
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 259 NEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN 378
N + GLVN TCY NS+LQ LY FR + ++N
Sbjct: 203 NTGFVGLVNQAMTCYLNSLLQTLYMTPEFRNAIYNQLSEN 242
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLF--YSI---AT 438
GL N GNTCY NSVLQ L+ P + ++ KE L +L +SI AT
Sbjct: 697 GLRNLGNTCYMNSVLQCLFNTAPLAAYFVSGAFRDDINKENPLGTSGELAEQFSILVRAT 756
Query: 439 QKKKVGSIAPKKF 477
+ S++P +F
Sbjct: 757 NCGRFKSLSPLEF 769
>SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +1
Query: 268 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKK 447
+ GL N G TCY NSVLQ LY RE VL ++ K+++ + LF +
Sbjct: 4 FVGLKNAGATCYMNSVLQQLYMQPGIREYVLGLD-EDYVEKDSVFYQIQSLFGHL--MDS 60
Query: 448 KVGSIAPKKF 477
K+ AP++F
Sbjct: 61 KLQYFAPEQF 70
>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
Length = 1088
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 268 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK 369
+ GL N GNTCY NSVLQ L F+++ + +
Sbjct: 214 FTGLRNLGNTCYMNSVLQVLMTLPEFKQRYADLR 247
>SB_16315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFY 426
GL+N GNTC+ N ++QAL R+ L + K T L C L +
Sbjct: 40 GLINLGNTCFMNCIVQALTHTPLLRDYFLSDQHNCKGDAGTCLVCEMGLLF 90
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 256 PNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVL-EYK 369
P GL N GNTC+ N+ LQ L+ +PF+ L EY+
Sbjct: 459 PQPGLCGLENLGNTCFMNAGLQCLFVIKPFQRFFLSEYE 497
>SB_21866| Best HMM Match : UCH (HMM E-Value=0)
Length = 2165
Score = 35.5 bits (78), Expect = 0.041
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 256 PNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVL 360
P Y GL N G TCY NSV+Q L+ R+ VL
Sbjct: 1251 PYMGYVGLKNAGATCYMNSVIQQLFMIPELRKGVL 1285
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE 393
GL N GNTC+ NSV+Q L + P ++ Y A + T+E
Sbjct: 117 GLSNLGNTCFLNSVVQVLTYTAP----LVNYLATQEHTRE 152
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 522 QQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGFSASQ 665
Q+DAHEFL ++I+ + + LA + + + K + + G+ SQ
Sbjct: 201 QEDAHEFLRYVIDGMQKSCLAGQPEKMDRYSKETTIVHGIFGGYYRSQ 248
>SB_6591| Best HMM Match : UCH (HMM E-Value=0.00022)
Length = 340
Score = 34.7 bits (76), Expect = 0.071
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 238 RVRAVPPNEHYFGLVNFGNTCYSNSVLQAL 327
RV P GL+N GNTCY N+ LQAL
Sbjct: 112 RVPTSNPVHSLCGLMNIGNTCYMNAALQAL 141
>SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)
Length = 781
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +1
Query: 283 NFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSI 462
N GNTCY N++LQ+L PF + + + N + CL Y + K+ +
Sbjct: 608 NLGNTCYMNAILQSLLGIEPFAQDLANKELHNLVSNS---QCLLKSAYGLLCCKRNKCEL 664
Query: 463 APKKFIARLRKEKEELTITCNKMPMN 540
++ LRK K +++ + N
Sbjct: 665 DVQRM--HLRKFKRQISEAATRFSGN 688
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/26 (42%), Positives = 23/26 (88%), Gaps = 1/26 (3%)
Frame = +3
Query: 516 YMQQDAHEFLNFLINHIN-EIILAER 590
Y QQDAHEF+++L++ ++ E++L+++
Sbjct: 819 YQQQDAHEFMHYLMDRLHTELLLSQK 844
>SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)
Length = 711
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 250 VPPNEHYFGLVNFGNTCYSNSVLQALYFCRPF 345
+P + GL N N CY+N+V+Q L C F
Sbjct: 59 LPQPPAFVGLKNRSNLCYANAVIQVLRNCPGF 90
>SB_16638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQAL--------YFCRPFREKVLEYKAKNK-RTKETLLTCLADLFY 426
GL N GNTC+ NS LQ L YF +E V E N K + ADL
Sbjct: 223 GLANLGNTCFMNSGLQCLSNTMTLTKYFLS--KEYVDELNTDNPLGMKGEIAKAYADLLN 280
Query: 427 SIATQKKKVGSIAPKKF 477
I + + SIAP++F
Sbjct: 281 QIWSGQS--SSIAPRQF 295
>SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYK-----AKNKRTKETLLTCLADLFYSIAT 438
GL N GNTCY N+ +Q L + + Y + + E++ L DLF ++
Sbjct: 98 GLNNLGNTCYMNATVQCLRNVPELHDSLTNYSGNLGFGSDIGSPESVTVALRDLFKTMDK 157
Query: 439 QKKKVGSI 462
+ V I
Sbjct: 158 TSEAVPPI 165
>SB_43026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQAL 327
GL N GNTCY N+ LQ L
Sbjct: 57 GLKNLGNTCYLNATLQML 74
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 274 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLL 402
G++N G TCY S +Q L+ R +L AK +R K +L
Sbjct: 1123 GIINLGATCYMASCIQQLFLMPQARCSIL--NAKVRRLKHGVL 1163
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 522 QQDAHEFLNFLINHINE--IILAERNQSTLKVQKNNSGENV 638
Q+DA EFL+ L+N I+E I+L++ + K + + S E V
Sbjct: 402 QEDAEEFLSCLLNGIHEEMIVLSKLDPPLPKPESHESSEGV 442
>SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14)
Length = 961
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 516 YMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGF-SASQTL 671
+ +QD E + ++ H N++++ L ++ S NV C F S+S TL
Sbjct: 600 FSKQDRVEVVQYIKEHQNKVLIILDGYDELPLEARESIHNVVCKKFYSSSYTL 652
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +1
Query: 193 PA*NGRKYITVGKRYRVRAVPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKA 372
PA + R T G R +R P N +Y + +TCYSN+ L A R R + K
Sbjct: 3153 PAESSRHRFTRG-RDLMRGPPMNAYYSTHTDTDSTCYSNA-LSAERKSRTGRSGEKKKKK 3210
Query: 373 KNKRTKET 396
K+K+++ +
Sbjct: 3211 KHKQSRSS 3218
>SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)
Length = 916
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 214 YITVGKRYRVRAVPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEY 366
Y++ Y + + + + GLV +CYSN AL C +E+ Y
Sbjct: 647 YLSCSANYNIFPISGSNAFLGLVRKTGSCYSNG---ALCSCSSDKERTCSY 694
>SB_52862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 564 INEIILAERNQSTLKVQKNNSGENVTCNGFSASQTLNP 677
INE+I + N ST+K K + ++T + S S+ NP
Sbjct: 354 INELISRKTNNSTIKEVKLDDDHSIT-DSLSLSEAFNP 390
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,615,999
Number of Sequences: 59808
Number of extensions: 377774
Number of successful extensions: 681
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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