Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060334.seq
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    27   0.42 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.0  

>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -2

Query: 239 RYLFPTVIYLRPFYAGN*GQNPDILTFAILFLR 141
           R L P  +YL      N  QNP +L+FAILFLR
Sbjct: 25  RMLSPERLYLLGDPRTN--QNPALLSFAILFLR 55


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 558 LLGSSGIHGHLVACNCQFL 502
           LL ++G  GHL  CN  FL
Sbjct: 528 LLKTAGATGHLSCCNSLFL 546


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 389  LVLLFLALYSNTFSLNGRQKYKACNTE 309
            +V +F+     TF   G Q+YK C+ +
Sbjct: 1113 MVNIFVGFVIVTFQNEGEQEYKNCDLD 1139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,722
Number of Sequences: 2352
Number of extensions: 12758
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)