Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060333.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   3.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   9.5  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.5  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 168 SRGPYVRXWSMMFTFLCP 221
           SRG + R WSM  T L P
Sbjct: 211 SRGLFHRGWSMSGTMLVP 228


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 168 SRGPYVRXWSMMFTFLCP 221
           SRG + R WSM  T L P
Sbjct: 211 SRGLFHRGWSMSGTMLVP 228


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 168 SRGPYVRXWSMMFTFLCP 221
           SRG + R WSM  T L P
Sbjct: 211 SRGLFHRGWSMSGTMLVP 228


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 168 SRGPYVRXWSMMFTFLCP 221
           SRG + R WSM  T L P
Sbjct: 211 SRGLFHRGWSMSGTMLVP 228


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 168 SRGPYVRXWSMMFTFLCP 221
           SRG + R WSM  T L P
Sbjct: 211 SRGLFHRGWSMSGTMLVP 228


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -1

Query: 390 ETYVHHDTFYRRHXDRTYEYHHHGH 316
           E Y++H  + + +      Y+H+G+
Sbjct: 369 ENYINHQNYVQGYQGEHPNYNHYGY 393


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 481 TGVPSNFVQAKRDNIYLKKNSPKL 552
           TG+P+    A    + +KK SP++
Sbjct: 222 TGIPTPSTSASPPTVNIKKESPQM 245


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -1

Query: 390 ETYVHHDTFYRRHXDRTYEYHHHGH 316
           E Y++H  + + +      Y+H+G+
Sbjct: 317 ENYINHQNYVQGYQGEHPNYNHYGY 341


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/56 (26%), Positives = 21/56 (37%)
 Frame = -1

Query: 336 EYHHHGHAEFGRQXVRYPMIRHWFGXQLLXTQ*GCLEFLDIET*TSLTXSGRMGPL 169
           +YHH     FG   V   M R ++   +  T    L   D+   T  +     GPL
Sbjct: 134 DYHHQLLGHFGATKVYNSMKREYYWPNMYRTIKKRLRSCDLCQKTKSSNRPHQGPL 189


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 157 PVRVQGAHTSGXGQ*CSR 210
           PVR+ G H  G    C++
Sbjct: 196 PVRIMGVHRPGFDNDCNK 213


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +2

Query: 287 YRTCCRPNSACPWWW 331
           YR C RP      WW
Sbjct: 256 YRYCYRPYPVYNQWW 270


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 386 VSPPTKPWAALASSRQTSDSGERAFCGNRLLLPAFPATS 502
           V+P T P  A  S + TS +   +    + L   FP +S
Sbjct: 149 VTPKTSPNEASMSPQSTSSNNSASPKACQFLYNQFPGSS 187


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 386 VSPPTKPWAALASSRQTSDSGERAFCGNRLLLPAFPATS 502
           V+P T P  A  S + TS +   +    + L   FP +S
Sbjct: 169 VTPKTSPNEASMSPQSTSSNNSASPKACQFLYNQFPGSS 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,813
Number of Sequences: 336
Number of extensions: 3440
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)