Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060333.seq
(687 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 105 4e-23
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 105 4e-23
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 105 4e-23
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 105 4e-23
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 103 2e-22
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 30 3.4
BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p pro... 29 4.5
AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p pro... 29 4.5
AE014298-789|AAN09151.2| 312|Drosophila melanogaster CG15771-PB... 29 4.5
AE014298-788|AAF46077.4| 355|Drosophila melanogaster CG15771-PA... 29 4.5
AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA... 29 4.5
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 29 7.9
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 29 7.9
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 29 7.9
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 29 7.9
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 29 7.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 29 7.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 29 7.9
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 105 bits (253), Expect = 4e-23
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +3
Query: 255 AGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGGRMFRPQRSPGRRWHRRV 431
AG QTSAESWGTG AVARIPRVRGGGTHRSG GAFG MCRGGRMF P ++ RRWHR+V
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKT-FRRWHRKV 118
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 158 PFVFKGPIRPXLVNDVHVSMSKNSRQPYCV 247
P VFK PIRP +VN+VH + +N+RQ Y V
Sbjct: 28 PAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLP 159
MSL ARPLVSVY+EK+E + LP
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLP 28
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 105 bits (253), Expect = 4e-23
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +3
Query: 255 AGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGGRMFRPQRSPGRRWHRRV 431
AG QTSAESWGTG AVARIPRVRGGGTHRSG GAFG MCRGGRMF P ++ RRWHR+V
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKT-FRRWHRKV 118
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 158 PFVFKGPIRPXLVNDVHVSMSKNSRQPYCV 247
P VFK PIRP +VN+VH + +N+RQ Y V
Sbjct: 28 PAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLP 159
MSL ARPLVSVY+EK+E + LP
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLP 28
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 105 bits (253), Expect = 4e-23
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +3
Query: 255 AGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGGRMFRPQRSPGRRWHRRV 431
AG QTSAESWGTG AVARIPRVRGGGTHRSG GAFG MCRGGRMF P ++ RRWHR+V
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKT-FRRWHRKV 118
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 158 PFVFKGPIRPXLVNDVHVSMSKNSRQPYCV 247
P VFK PIRP +VN+VH + +N+RQ Y V
Sbjct: 28 PAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLP 159
MSL ARPLVSVY+EK+E + LP
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLP 28
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 105 bits (253), Expect = 4e-23
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +3
Query: 255 AGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGGRMFRPQRSPGRRWHRRV 431
AG QTSAESWGTG AVARIPRVRGGGTHRSG GAFG MCRGGRMF P ++ RRWHR+V
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKT-FRRWHRKV 118
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 158 PFVFKGPIRPXLVNDVHVSMSKNSRQPYCV 247
P VFK PIRP +VN+VH + +N+RQ Y V
Sbjct: 28 PAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 76 MSLSVARPLVSVYSEKSETVQGAAKPLP 159
MSL ARPLVSVY+EK+E + LP
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLP 28
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 103 bits (247), Expect = 2e-22
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +3
Query: 264 QTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGGRMFRPQRSPGRRWHRRV 431
QTSAESWGTG AVARIPRVRGGGTHRSG GAFG MCRGGRMF P ++ RRWHRRV
Sbjct: 2 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKT-FRRWHRRV 56
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 160 REGAWLHPAPSRSFLNTPTLKVGLPIDS 77
++G L P+P +F+N+P ++GL ID+
Sbjct: 2264 KDGMLLRPSPEINFINSPNGQIGLIIDA 2291
>BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p
protein.
Length = 798
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -1
Query: 471 RLPQKARSPLSXV*RDDANAAQGFVGGETYVHHDTFYRRHXDRTYEYHHHGH 316
RLP PL+ A++ + + H D+ RH R + +HHH H
Sbjct: 355 RLPSSDNEPLAEP--TTIKASEEHMQQPSGRHRDSHSHRHHQRHHHHHHHRH 404
>AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p
protein.
Length = 552
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -1
Query: 471 RLPQKARSPLSXV*RDDANAAQGFVGGETYVHHDTFYRRHXDRTYEYHHHGH 316
RLP PL+ A++ + + H D+ RH R + +HHH H
Sbjct: 109 RLPSSDNEPLAEP--TTIKASEEHMQQPSGRHRDSHSHRHHQRHHHHHHHRH 158
>AE014298-789|AAN09151.2| 312|Drosophila melanogaster CG15771-PB,
isoform B protein.
Length = 312
Score = 29.5 bits (63), Expect = 4.5
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = -1
Query: 573 VGLQPRGKFRGILFQINVVPLSLNEVA-GNAGSSKRLPQKARSPLSXV*RDDANAAQGFV 397
V +P K +L P LN VA S R SP+S ++++ V
Sbjct: 197 VEYKPHVKLGSLLEMYKYFP-RLNSVALPEMPSVSRRRGSHMSPISQGSGSGSSSSAICV 255
Query: 396 GGETYVHHDTFYRRHXDRTYEYHHHGH 316
G + +H +++H ++ ++HHH H
Sbjct: 256 PGAGHGYHHHHHQQHQEQQQQHHHHHH 282
>AE014298-788|AAF46077.4| 355|Drosophila melanogaster CG15771-PA,
isoform A protein.
Length = 355
Score = 29.5 bits (63), Expect = 4.5
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = -1
Query: 573 VGLQPRGKFRGILFQINVVPLSLNEVA-GNAGSSKRLPQKARSPLSXV*RDDANAAQGFV 397
V +P K +L P LN VA S R SP+S ++++ V
Sbjct: 240 VEYKPHVKLGSLLEMYKYFP-RLNSVALPEMPSVSRRRGSHMSPISQGSGSGSSSSAICV 298
Query: 396 GGETYVHHDTFYRRHXDRTYEYHHHGH 316
G + +H +++H ++ ++HHH H
Sbjct: 299 PGAGHGYHHHHHQQHQEQQQQHHHHHH 325
>AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA
protein.
Length = 980
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -1
Query: 471 RLPQKARSPLSXV*RDDANAAQGFVGGETYVHHDTFYRRHXDRTYEYHHHGH 316
RLP PL+ A++ + + H D+ RH R + +HHH H
Sbjct: 537 RLPSSDNEPLAEP--TTIKASEEHMQQPSGRHRDSHSHRHHQRHHHHHHHRH 586
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 252 GAGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGG 380
G G T ES GT V ++ R GG SG G + GG
Sbjct: 919 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 28.7 bits (61), Expect = 7.9
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +2
Query: 293 TCCRP-NSACPWWWY 334
TCC P ++ CPW WY
Sbjct: 718 TCCMPCSNQCPWSWY 732
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 252 GAGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGG 380
G G T ES GT V ++ R GG SG G + GG
Sbjct: 1043 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 252 GAGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGG 380
G G T ES GT V ++ R GG SG G + GG
Sbjct: 1096 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 252 GAGXQTSAESWGTGXAVARIPRVRGGGTHRSGXGAFGKMCRGG 380
G G T ES GT V ++ R GG SG G + GG
Sbjct: 1043 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 28.7 bits (61), Expect = 7.9
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +2
Query: 293 TCCRP-NSACPWWWY 334
TCC P ++ CPW WY
Sbjct: 117 TCCMPCSNQCPWSWY 131
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 28.7 bits (61), Expect = 7.9
Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +2
Query: 293 TCCRP-NSACPWWWY 334
TCC P ++ CPW WY
Sbjct: 718 TCCMPCSNQCPWSWY 732
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,762,364
Number of Sequences: 53049
Number of extensions: 710744
Number of successful extensions: 2982
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2941
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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