Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060332.seq
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   3.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.4  

>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 211 VFASVVFWQAIIKKIRKQFSASINIRCVRIEFFKNY 104
           VFA+  F+      I + F+A +    V ++F  NY
Sbjct: 293 VFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNY 328


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 211 VFASVVFWQAIIKKIRKQFSASINIRCVRIEFFKNY 104
           VFA+  F+      I + F+A +    V ++F  NY
Sbjct: 613 VFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNY 648


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +1

Query: 232 SFRTRNQTTGTSSALTAVSDQSRWLEINQFSAWERRDNQYAHKWXIKV 375
           S R++     T+   + V DQ+  LE +     +  D+   H+W   V
Sbjct: 77  SKRSKRPNGDTNGDTSQVDDQNESLEASVNENSKNGDDDEGHEWQADV 124


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 130 VRIEFFKNYFVCMKITFGLLTIIIFVVEQKGFARIGTFVH 11
           V I  F  +++C    + L+ + +F   Q+   +  TFVH
Sbjct: 314 VVIYTFNLFYLCFCFYWLLVMVAMFSRTQQSANKTATFVH 353


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 130 VRIEFFKNYFVCMKITFGLLTIIIFVVEQKGFARIGTFVH 11
           V I  F  +++C    + L+ + +F   Q+   +  TFVH
Sbjct: 270 VVIYTFNLFYLCFCFYWLLVMVAMFSRTQQSANKTATFVH 309


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 23   ANSRKPFLFYNEDYYCEKPKRY 88
            ANS KP+LF   ++  E+ K +
Sbjct: 1038 ANSDKPYLFETVEFGREEGKEH 1059


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,072
Number of Sequences: 336
Number of extensions: 2244
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)