Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060328.seq
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g31860.2 68417.m04527 protein phosphatase 2C, putative / PP2C... 84 8e-17
At4g31860.1 68417.m04526 protein phosphatase 2C, putative / PP2C... 84 8e-17
At2g25070.1 68415.m02999 protein phosphatase 2C, putative / PP2C... 82 3e-16
At1g43900.1 68414.m05065 protein phosphatase 2C, putative / PP2C... 48 4e-06
At1g07430.1 68414.m00793 protein phosphatase 2C, putative / PP2C... 47 9e-06
At1g67820.1 68414.m07741 protein phosphatase 2C, putative / PP2C... 46 2e-05
At1g78200.2 68414.m09113 protein phosphatase 2C, putative / PP2C... 46 2e-05
At1g78200.1 68414.m09112 protein phosphatase 2C, putative / PP2C... 46 2e-05
At5g10740.1 68418.m01245 protein phosphatase 2C-related / PP2C-r... 45 5e-05
At2g29380.1 68415.m03569 protein phosphatase 2C, putative / PP2C... 43 2e-04
At4g27800.3 68417.m03994 protein phosphatase 2C PPH1 / PP2C PPH1... 42 4e-04
At4g27800.2 68417.m03993 protein phosphatase 2C PPH1 / PP2C PPH1... 42 4e-04
At4g27800.1 68417.m03992 protein phosphatase 2C PPH1 / PP2C PPH1... 42 4e-04
At4g31750.1 68417.m04506 protein phosphatase 2C, putative / PP2C... 40 0.001
At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C... 38 0.004
At5g59220.1 68418.m07422 protein phosphatase 2C, putative / PP2C... 38 0.005
At1g34750.1 68414.m04321 protein phosphatase 2C, putative / PP2C... 38 0.005
At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C... 37 0.012
At5g53140.1 68418.m06606 protein phosphatase 2C, putative / PP2C... 36 0.016
At2g20630.2 68415.m02417 protein phosphatase 2C, putative / PP2C... 36 0.028
At2g20630.1 68415.m02418 protein phosphatase 2C, putative / PP2C... 36 0.028
At1g22280.2 68414.m02785 protein phosphatase 2C, putative / PP2C... 36 0.028
At1g22280.1 68414.m02786 protein phosphatase 2C, putative / PP2C... 36 0.028
At5g24940.1 68418.m02953 protein phosphatase 2C, putative / PP2C... 35 0.038
At4g28400.1 68417.m04065 protein phosphatase 2C, putative / PP2C... 34 0.066
At2g40180.1 68415.m04941 protein phosphatase 2C, putative / PP2C... 34 0.066
At3g62260.2 68416.m06995 protein phosphatase 2C, putative / PP2C... 33 0.11
At3g62260.1 68416.m06994 protein phosphatase 2C, putative / PP2C... 33 0.11
At3g51470.1 68416.m05637 protein phosphatase 2C, putative / PP2C... 33 0.11
At4g26080.1 68417.m03755 protein phosphatase 2C ABI1 / PP2C ABI1... 33 0.15
At3g11410.1 68416.m01392 protein phosphatase 2C, putative / PP2C... 33 0.15
At1g72770.1 68414.m08414 protein phosphatase 2C P2C-HA / PP2C P2... 33 0.20
At5g51760.1 68418.m06418 protein phosphatase 2C, putative / PP2C... 32 0.26
At1g68410.1 68414.m07815 protein phosphatase 2C-related / PP2C-r... 32 0.35
At5g57050.1 68418.m07121 protein phosphatase 2C ABI2 / PP2C ABI2... 31 0.61
At2g34740.1 68415.m04266 protein phosphatase 2C, putative / PP2C... 31 0.61
At1g47380.1 68414.m05245 protein phosphatase 2C-related / PP2C-r... 31 0.61
At1g17550.1 68414.m02161 protein phosphatase 2C-related / PP2C-r... 30 1.4
At4g19560.1 68417.m02876 cyclin family protein similar to SP|O88... 29 1.9
At1g09160.2 68414.m01023 protein phosphatase 2C-related / PP2C-r... 29 2.5
At1g09160.1 68414.m01022 protein phosphatase 2C-related / PP2C-r... 29 2.5
At2g33700.1 68415.m04130 protein phosphatase 2C, putative / PP2C... 29 3.3
At2g25620.1 68415.m03069 protein phosphatase 2C, putative / PP2C... 29 3.3
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 29 3.3
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 29 3.3
At1g29940.1 68414.m03658 DNA-directed RNA polymerase family prot... 29 3.3
At1g18030.1 68414.m02230 protein phosphatase 2C, putative / PP2C... 29 3.3
At3g50990.1 68416.m05583 peroxidase, putative similar to peroxid... 28 4.3
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 28 4.3
At1g48040.1 68414.m05354 protein phosphatase 2C-related / PP2C-r... 28 4.3
At5g02760.1 68418.m00218 protein phosphatase 2C family protein /... 28 5.7
At3g17250.1 68416.m02205 protein phosphatase 2C-related / PP2C-r... 28 5.7
At2g20050.1 68415.m02343 protein phosphatase 2C, putative / PP2C... 28 5.7
At3g48675.1 68416.m05315 hypothetical protein 27 7.5
At3g15260.2 68416.m01928 protein phosphatase 2C, putative / PP2C... 27 7.5
At3g15260.1 68416.m01927 protein phosphatase 2C, putative / PP2C... 27 7.5
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 27 7.5
At1g55700.1 68414.m06378 DC1 domain-containing protein contains ... 27 10.0
>At4g31860.2 68417.m04527 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C, Schizosaccharomyces
pombe, PIR2:S54297
Length = 275
Score = 83.8 bits (198), Expect = 8e-17
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +3
Query: 258 MGAFLNKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFD 437
MG +L+ P+T K++E GE + LRYG++SMQGWR MEDAH A L L+ + S+ V+D
Sbjct: 1 MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLD---DNTSFLGVYD 57
Query: 438 GHAGARVSAHCAENLLECILQTEDF 512
GH G VS CA+ L + +L E +
Sbjct: 58 GHGGKVVSKFCAKYLHQQVLSDEAY 82
>At4g31860.1 68417.m04526 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C, Schizosaccharomyces
pombe, PIR2:S54297
Length = 357
Score = 83.8 bits (198), Expect = 8e-17
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +3
Query: 258 MGAFLNKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFD 437
MG +L+ P+T K++E GE + LRYG++SMQGWR MEDAH A L L+ + S+ V+D
Sbjct: 1 MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLD---DNTSFLGVYD 57
Query: 438 GHAGARVSAHCAENLLECILQTEDF 512
GH G VS CA+ L + +L E +
Sbjct: 58 GHGGKVVSKFCAKYLHQQVLSDEAY 82
>At2g25070.1 68415.m02999 protein phosphatase 2C, putative / PP2C,
putative
Length = 355
Score = 81.8 bits (193), Expect = 3e-16
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +3
Query: 258 MGAFLNKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFD 437
MG +L+ P+T+K +E GE + LR+G++SMQGWR MEDAH A L L+ S+F V+D
Sbjct: 1 MGTYLSSPKTEKLSEDGENDKLRFGLSSMQGWRATMEDAHAAILDLD---DKTSFFGVYD 57
Query: 438 GHAGARVSAHCAENLLECILQTEDF 512
GH G V+ CA+ L + ++ E +
Sbjct: 58 GHGGKVVAKFCAKYLHQQVISNEAY 82
>At1g43900.1 68414.m05065 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase type 2C
GI:4336436 from [Lotus japonicus]
Length = 371
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDAHHAQLT-LNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQT 503
YG +S++G R MED +++ +NG + ++F VFDGH GAR + + NL + ++
Sbjct: 124 YGYSSLKGKRATMEDYFETRISDVNGQMV--AFFGVFDGHGGARTAEYLKNNLFKNLVSH 181
Query: 504 EDF 512
+DF
Sbjct: 182 DDF 184
>At1g07430.1 68414.m00793 protein phosphatase 2C, putative / PP2C,
putative similar to GB:CAB90633 from [Fagus sylvatica]
Length = 442
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 324 RYGVASMQGWRVEMEDAH--HAQLTLNGT---LSDWSYFAVFDGHAGARVSAHCAENLLE 488
RYGVAS+ G R +MEDA H T + W YF V+DGH + V+A C E L E
Sbjct: 120 RYGVASVCGRRRDMEDAVALHPSFVRKQTEFSRTRWHYFGVYDGHGCSHVAARCKERLHE 179
Query: 489 CI 494
+
Sbjct: 180 LV 181
>At1g67820.1 68414.m07741 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C
emb|CAA72341.1
Length = 445
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +3
Query: 312 GNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLEC 491
GNG +GV S G + MED H L G S S+F V+DGH GA+ + AENL +
Sbjct: 118 GNG--FGVVSRNGKKKFMEDTHRIVPCLVGN-SKKSFFGVYDGHGGAKAAEFVAENLHKY 174
Query: 492 ILQ 500
+++
Sbjct: 175 VVE 177
>At1g78200.2 68414.m09113 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C GB:CAA72341
[Medicago sativa]; contains Pfam profile: PF00481
Protein phosphatase 2C
Length = 283
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 303 SGEGNGLRYGVASMQGW-RVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAEN 479
+GEG G++YG + ++G MED H A+ T N ++ FA+FDGH G V+A+ ++
Sbjct: 26 NGEG-GIKYGFSLIKGKSNHSMEDYHVAKFT-NFNGNELGLFAIFDGHKGDHVAAYLQKH 83
Query: 480 LLECILQTEDF 512
L IL+ +F
Sbjct: 84 LFSNILKDGEF 94
>At1g78200.1 68414.m09112 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C GB:CAA72341
[Medicago sativa]; contains Pfam profile: PF00481
Protein phosphatase 2C
Length = 283
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 303 SGEGNGLRYGVASMQGW-RVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAEN 479
+GEG G++YG + ++G MED H A+ T N ++ FA+FDGH G V+A+ ++
Sbjct: 26 NGEG-GIKYGFSLIKGKSNHSMEDYHVAKFT-NFNGNELGLFAIFDGHKGDHVAAYLQKH 83
Query: 480 LLECILQTEDF 512
L IL+ +F
Sbjct: 84 LFSNILKDGEF 94
>At5g10740.1 68418.m01245 protein phosphatase 2C-related /
PP2C-related protein phosphatase 2C, alfalfa, PIR:T09640
Length = 354
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 264 AFLNKPETKKYNESGEG---NG-LRYGVASMQGWRVEMEDAHHAQLT-LNGTLSDWSYFA 428
++ N+P+T + SG G NG YG AS G R MED ++ +NG + F
Sbjct: 9 SYSNQPQTVEAPASGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGINGEIV--GLFG 66
Query: 429 VFDGHAGARVSAHCAENLLECILQTEDF 512
VFDGH GAR + + +L ++ F
Sbjct: 67 VFDGHGGARAAEYVKRHLFSNLITHPKF 94
>At2g29380.1 68415.m03569 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain; similar to protein phpsphatase 2C (PP2C)
(GI:7768151) [Fagus sylvatica].
Length = 362
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +3
Query: 324 RYGVASMQGWRVEMEDA---HHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENL 482
RYGV+S+ G R EMEDA H + + + YF V+DGH + V+A C E L
Sbjct: 77 RYGVSSVCGRRREMEDAVAIHPSFSSPKNSEFPQHYFGVYDGHGCSHVAARCRERL 132
>At4g27800.3 68417.m03994 protein phosphatase 2C PPH1 / PP2C PPH1
(PPH1) identical to SP|P49599|P2C3_ARATH Protein
phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis
thaliana}; similar to protein phosphatase-2C; PP2C
(GI:3643090) [Mesembryanthemum crystallinum]
Length = 326
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 LRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLL-ECI 494
+R+G S+QG+R EMED + + + +SY AVFDGHAG+ E L EC+
Sbjct: 58 IRWGYTSVQGFRDEMEDDI---VIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECV 113
>At4g27800.2 68417.m03993 protein phosphatase 2C PPH1 / PP2C PPH1
(PPH1) identical to SP|P49599|P2C3_ARATH Protein
phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis
thaliana}; similar to protein phosphatase-2C; PP2C
(GI:3643090) [Mesembryanthemum crystallinum]
Length = 335
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 LRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLL-ECI 494
+R+G S+QG+R EMED + + + +SY AVFDGHAG+ E L EC+
Sbjct: 58 IRWGYTSVQGFRDEMEDDI---VIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECV 113
>At4g27800.1 68417.m03992 protein phosphatase 2C PPH1 / PP2C PPH1
(PPH1) identical to SP|P49599|P2C3_ARATH Protein
phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis
thaliana}; similar to protein phosphatase-2C; PP2C
(GI:3643090) [Mesembryanthemum crystallinum]
Length = 388
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 LRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLL-ECI 494
+R+G S+QG+R EMED + + + +SY AVFDGHAG+ E L EC+
Sbjct: 58 IRWGYTSVQGFRDEMEDDI---VIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECV 113
>At4g31750.1 68417.m04506 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C, Medicago sativa,
PID:g2582800
Length = 311
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDAHHAQLT-LNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQT 503
YG AS G R MED + ++ + G + F VFDGH GAR + + +NL +++
Sbjct: 34 YGYASSPGKRSSMEDFYETRIDGVEGEIV--GLFGVFDGHGGARAAEYVKQNLFSNLIRH 91
Query: 504 EDF 512
F
Sbjct: 92 PKF 94
>At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C
(GI:4587992){Arabidopsis thaliana}
Length = 396
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +3
Query: 252 TSMGAFLNKPETKKYNESGEGNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAV 431
+S A P + EG+G Y V +G R MED A L+G + F V
Sbjct: 117 SSSAAVAATPREECREVEREGDG--YSVYCKRGRREAMEDRFSAITNLHGDRKQ-AIFGV 173
Query: 432 FDGHAGARVSAHCAENLLECILQ 500
+DGH G + + A+NL + I++
Sbjct: 174 YDGHGGVKAAEFAAKNLDKNIVE 196
>At5g59220.1 68418.m07422 protein phosphatase 2C, putative / PP2C,
putative ABA induced protein phosphatase 2C, Fagus
sylvatica, EMBL:FSY277743
Length = 413
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +3
Query: 324 RYGVASMQGWRVEMEDAHHAQLTLNGTLSDWS-----YFAVFDGHAGARVSAHCAENLLE 488
+YGVAS+ G R EMEDA + +++S Y V+DGH + V+ C E L E
Sbjct: 111 KYGVASVCGRRREMEDAVAVHPFFSRHQTEYSSTGFHYCGVYDGHGCSHVAMKCRERLHE 170
Query: 489 CI 494
+
Sbjct: 171 LV 172
>At1g34750.1 68414.m04321 protein phosphatase 2C, putative / PP2C,
putative similar to GB:AAD17805 from (Lotus japonicus)
(Proc. Natl. Acad. Sci. U.S.A. 96 (4), 1738-1743 (1999))
Length = 282
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +3
Query: 288 KKYNESGEGNGLRYGVASMQGWRVE-MEDAHHAQLT-LNGTLSDWSYFAVFDGHAGARVS 461
K N GE +++G + ++G MED H ++ ++G ++ FA++DGH G RV
Sbjct: 25 KGRNNDGE---IKFGYSLVKGKANHPMEDYHVSKFVKIDG--NELGLFAIYDGHLGERVP 79
Query: 462 AHCAENLLECILQTEDF 512
A+ ++L IL+ E F
Sbjct: 80 AYLQKHLFSNILKEEQF 96
>At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C GI:2582800
from [Medicago sativa]
Length = 380
Score = 36.7 bits (81), Expect = 0.012
Identities = 24/63 (38%), Positives = 30/63 (47%)
Frame = +3
Query: 309 EGNGLRYGVASMQGWRVEMEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLE 488
EG+G Y V +G R MED A L G + F V+DGH G + A+NL
Sbjct: 119 EGDG--YSVYCKRGKREAMEDRFSAITNLQGDPKQ-AIFGVYDGHGGPTAAEFAAKNLCS 175
Query: 489 CIL 497
IL
Sbjct: 176 NIL 178
>At5g53140.1 68418.m06606 protein phosphatase 2C, putative / PP2C,
putative
Length = 420
Score = 36.3 bits (80), Expect = 0.016
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 309 EGNGLRYGVASMQGWRVEMEDAHHAQL-TLNGTLSDWSYFAVFDGHAGARVSAHCAENLL 485
+ L G S +G R MED + + T+ G F +FDGH G+R + + E+L
Sbjct: 96 DDGSLSCGYCSFRGKRSTMEDFYDIKASTIEGQAV--CMFGIFDGHGGSRAAEYLKEHLF 153
Query: 486 ECILQTEDFGVKT*LKXSRT 545
+++ F T L + T
Sbjct: 154 NNLMKHPQFLTDTKLALNET 173
>At2g20630.2 68415.m02417 protein phosphatase 2C, putative / PP2C,
putative
Length = 290
Score = 35.5 bits (78), Expect = 0.028
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 411 DWSYFAVFDGHAGARVSAHCAENLLECILQTEDFGVKT 524
D FA+FDGH G V+ + NL + IL+ +DF T
Sbjct: 60 DLGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDT 97
>At2g20630.1 68415.m02418 protein phosphatase 2C, putative / PP2C,
putative
Length = 279
Score = 35.5 bits (78), Expect = 0.028
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 411 DWSYFAVFDGHAGARVSAHCAENLLECILQTEDFGVKT 524
D FA+FDGH G V+ + NL + IL+ +DF T
Sbjct: 60 DLGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDT 97
>At1g22280.2 68414.m02785 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase type 2C
GI:4336436 from [Lotus japonicus]
Length = 199
Score = 35.5 bits (78), Expect = 0.028
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 SGEGNGLRYGVASMQGWRVE-MEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAEN 479
S EG ++YG + ++G MED H A +N + FA++DGH G V A+ +
Sbjct: 27 SDEGM-IKYGFSLVKGKANHPMEDYHVANF-INIQDHELGLFAIYDGHMGDSVPAYLQKR 84
Query: 480 LLECILQTEDFGV 518
L IL+ +F V
Sbjct: 85 LFSNILKEGEFWV 97
>At1g22280.1 68414.m02786 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase type 2C
GI:4336436 from [Lotus japonicus]
Length = 281
Score = 35.5 bits (78), Expect = 0.028
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 SGEGNGLRYGVASMQGWRVE-MEDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAEN 479
S EG ++YG + ++G MED H A +N + FA++DGH G V A+ +
Sbjct: 27 SDEGM-IKYGFSLVKGKANHPMEDYHVANF-INIQDHELGLFAIYDGHMGDSVPAYLQKR 84
Query: 480 LLECILQTEDFGV 518
L IL+ +F V
Sbjct: 85 LFSNILKEGEFWV 97
>At5g24940.1 68418.m02953 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase type 2C - Lotus japonicus,
EMBL:AF092432
Length = 447
Score = 35.1 bits (77), Expect = 0.038
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDAHHAQLT-LNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQT 503
YG AS G R MED ++ ++G + F VFDGH G+R + + +L ++
Sbjct: 34 YGYASSAGKRSSMEDFFETRIDGIDGEIV--GLFGVFDGHGGSRAAEYVKRHLFSNLITH 91
Query: 504 EDF 512
F
Sbjct: 92 PKF 94
>At4g28400.1 68417.m04065 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C-fission yeast,
PIR2:S54297
Length = 283
Score = 34.3 bits (75), Expect = 0.066
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 423 FAVFDGHAGARVSAHCAENLLECILQTEDFGVKT 524
FA+FDGH G V+ + NL + IL+ +DF T
Sbjct: 68 FAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDT 101
>At2g40180.1 68415.m04941 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain; identical to protein phosphatase 2C (GI:4587992)
[Arabidopsis thaliana]
Length = 390
Score = 34.3 bits (75), Expect = 0.066
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDAHHAQLTLN--GTLSDWSYFAVFDGHAGARVSAHCAENL 482
Y V +G R MED + A + N G + ++F VFDGH G++ + A NL
Sbjct: 129 YSVYCKRGRRGPMEDRYFAAVDRNDDGGYKN-AFFGVFDGHGGSKAAEFAAMNL 181
>At3g62260.2 68416.m06995 protein phosphatase 2C, putative / PP2C,
putative phosphoprotein phosphatase (EC 3.1.3.16)
1A-alpha - Homo sapiens, PIR:S22423
Length = 384
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 417 SYFAVFDGHAGARVSAHCAENLLECILQTEDF 512
+++AVFDGH G +A+ EN + + E F
Sbjct: 116 AFYAVFDGHGGPEAAAYVRENAIRFFFEDEQF 147
>At3g62260.1 68416.m06994 protein phosphatase 2C, putative / PP2C,
putative phosphoprotein phosphatase (EC 3.1.3.16)
1A-alpha - Homo sapiens, PIR:S22423
Length = 383
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 417 SYFAVFDGHAGARVSAHCAENLLECILQTEDF 512
+++AVFDGH G +A+ EN + + E F
Sbjct: 115 AFYAVFDGHGGPEAAAYVRENAIRFFFEDEQF 146
>At3g51470.1 68416.m05637 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase-2C, Mesembryanthemum
crystallinum, EMBL:AF075580
Length = 361
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 324 RYGVASMQGWRVEMEDAHHA--QLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECIL 497
R G S +G + MED LT S +++ VFDGH G ++ +N+++ ++
Sbjct: 72 RSGSWSDKGPKQSMEDEFICVDDLTEYIGSSTGAFYGVFDGHGGVDAASFTKKNIMKLVM 131
Query: 498 QTEDFGVKT*LKXSRTGXLDLDKX*AELXEL 590
+ + F T K +R+ + D A+ L
Sbjct: 132 EDKHFPTST-KKATRSAFVKTDHALADASSL 161
>At4g26080.1 68417.m03755 protein phosphatase 2C ABI1 / PP2C ABI1 /
abscisic acid-insensitive 1 (ABI1) nearly identical to
SP|P49597 Protein phosphatase 2C ABI1 (EC 3.1.3.16)
(PP2C) (Abscisic acid- insensitive 1) {Arabidopsis
thaliana}
Length = 434
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 12/64 (18%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDA---------HHAQLTLNGTLSDWS---YFAVFDGHAGARVSAHC 470
YG S+ G R EMEDA + L+G S +F V+DGH G++V+ +C
Sbjct: 129 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 188
Query: 471 AENL 482
E +
Sbjct: 189 RERM 192
>At3g11410.1 68416.m01392 protein phosphatase 2C, putative / PP2C,
putative identical to protein phosphatase 2C (PP2C)
GB:P49598 [Arabidopsis thaliana]; contains Pfam profile
PF00481: Protein phosphatase 2C; identical to cDNA
protein phosphatase 2C GI:633027
Length = 399
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 324 RYGVASMQGWRVEMEDA---HHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECI 494
+ G S+ G R +MEDA H + L N + ++ VFDGH + V+ C E L + +
Sbjct: 104 KIGTTSVCGRRRDMEDAVSIHPSFLQRNS--ENHHFYGVFDGHGCSHVAEKCRERLHDIV 161
>At1g72770.1 68414.m08414 protein phosphatase 2C P2C-HA / PP2C
P2C-HA (P2C-HA) identical to protein phosphatase 2C
(AtP2C-HA) GB:AJ003119 [Arabidopsis thaliana] (Plant
Mol. Biol. 38 (5), 879-883 (1998))
Length = 511
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 17/69 (24%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDA-----HHAQLTLNGTLSDWS------------YFAVFDGHAGAR 455
+G S+QG R EMEDA H +L + + D +F V+DGH G +
Sbjct: 190 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 249
Query: 456 VSAHCAENL 482
V+ +C + L
Sbjct: 250 VADYCRDRL 258
>At5g51760.1 68418.m06418 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain; similar to protein phosphatase 2C (GI:10432446)
[Nicotiana tabacum]
Length = 416
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDAHHAQLTLN----GTLSDWSYFAVFDGHAGARVSAHCAENL 482
YG+ S+ G +MED+ + L +FAV+DGH G++VS C+ +
Sbjct: 109 YGIVSVMGRSRKMEDSVTVKPNLCKPEVNRQRPVHFFAVYDGHGGSQVSTLCSTTM 164
>At1g68410.1 68414.m07815 protein phosphatase 2C-related /
PP2C-related similar to protein phosphatase-2C
GB:AAC36697 from [Mesembryanthemum crystallinum]
Length = 436
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 414 WSYFAVFDGHAGARVSAHCAENLLECILQTEDFGV 518
+S FAVFDGH G + + ENLL ++ G+
Sbjct: 71 FSVFAVFDGHNGKAAAVYTRENLLNHVISALPSGL 105
>At5g57050.1 68418.m07121 protein phosphatase 2C ABI2 / PP2C ABI2 /
abscisic acid-insensitive 2 (ABI2) identical to
SP|O04719 Protein phosphatase 2C ABI2 (EC 3.1.3.16)
(PP2C) (Abscisic acid- insensitive 2) {Arabidopsis
thaliana}
Length = 423
Score = 31.1 bits (67), Expect = 0.61
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 16/68 (23%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDA-----HHAQLT----LNGTLSDW-------SYFAVFDGHAGARV 458
YGV S+ G R EMED+ Q++ L+G +++ +F V+DGH G++V
Sbjct: 113 YGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQV 172
Query: 459 SAHCAENL 482
+ +C E +
Sbjct: 173 ANYCRERM 180
>At2g34740.1 68415.m04266 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain; similar to protein phosphatase type 2C
(GI:4336436) [Lotus japonicus]
Length = 239
Score = 31.1 bits (67), Expect = 0.61
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 423 FAVFDGHAGARVSAHCAENLLECILQTEDF 512
+A+FDGH+G+ V+ + +L + IL DF
Sbjct: 20 YAIFDGHSGSDVADYLQNHLFDNILSQPDF 49
>At1g47380.1 68414.m05245 protein phosphatase 2C-related /
PP2C-related contains similarity to protein phosphatase
2C GB:AAD25933 GI:4587992 from [Arabidopsis thaliana]
Length = 428
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 384 QLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECIL 497
Q + ++ +S F +FDGH G+ + + ENLL +L
Sbjct: 52 QRVMGDGVTTFSVFGLFDGHNGSAAAIYTKENLLNNVL 89
>At1g17550.1 68414.m02161 protein phosphatase 2C-related /
PP2C-related similar to protein phosphatase 2C
GI:3242077 from (Arabidopsis thaliana)
Length = 511
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 17/69 (24%)
Frame = +3
Query: 327 YGVASMQGWRVEMEDA-----HHAQLTLNGTLSDWS------------YFAVFDGHAGAR 455
+G S+ G R EMEDA H ++ + + D +F V+DGH GA+
Sbjct: 189 WGTISICGGRSEMEDAVRALPHFLKIPIKMLMGDHEGMSPSLPYLTSHFFGVYDGHGGAQ 248
Query: 456 VSAHCAENL 482
V+ +C + +
Sbjct: 249 VADYCHDRI 257
>At4g19560.1 68417.m02876 cyclin family protein similar to SP|O88874
Cyclin K (Fragment) {Mus musculus}; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 474
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 512 EILRLQNTFKKIFCTVCGDPSSRMSIKHGEVRPVRECTVQSEL 384
EI + T ++IF V DP M+++H E+R V EL
Sbjct: 421 EINKTMQTGRQIFMKV-EDPDDNMTVEHSEIRNANNSGVDDEL 462
>At1g09160.2 68414.m01023 protein phosphatase 2C-related /
PP2C-related similar to GB:AAC16260
Length = 428
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 408 SDWSYFAVFDGHAGARVSAHCAENLLECIL 497
S +S F +FDGH G + + E+LLE ++
Sbjct: 64 SAFSVFGIFDGHNGNSAAIYTKEHLLENVV 93
>At1g09160.1 68414.m01022 protein phosphatase 2C-related /
PP2C-related similar to GB:AAC16260
Length = 428
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 408 SDWSYFAVFDGHAGARVSAHCAENLLECIL 497
S +S F +FDGH G + + E+LLE ++
Sbjct: 64 SAFSVFGIFDGHNGNSAAIYTKEHLLENVV 93
>At2g33700.1 68415.m04130 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain; similar to protein phosphatase-2C (PP2C)
(GI:3643085) [Mesembryanthemum crystallinum]
Length = 380
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Frame = +3
Query: 324 RYGVASMQGWRVEMEDAHHAQLTLNGTL-------SDWSYFAVFDGHAGARVSAHCAENL 482
R G + QG + MED H L L S +++ VFDGH G + +N+
Sbjct: 84 RSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLGAFYGVFDGHGGTDAAHFVRKNI 143
Query: 483 LECILQTEDF 512
L I++ F
Sbjct: 144 LRFIVEDSSF 153
>At2g25620.1 68415.m03069 protein phosphatase 2C, putative / PP2C,
putative
Length = 392
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Frame = +3
Query: 285 TKKYNESGEGNGLRYGVASMQGWRVEMEDAH-------HAQLTLNGTLSDWSYFAVFDGH 443
T + N+S R G S G R MEDA+ + LN +++ VFDGH
Sbjct: 76 TIEKNKSEFVPATRSGAWSDIGSRSSMEDAYLCVDNFMDSFGLLNSEAGPSAFYGVFDGH 135
Query: 444 AGARVSAHCAENLLECILQTEDF 512
G + ++ I++ ++F
Sbjct: 136 GGKHAAEFACHHIPRYIVEDQEF 158
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 366 EDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQTEDFGVK 521
+D+H + NG DW F+GH GA S+ N L + DF K
Sbjct: 39 KDSH--PMLRNGETGDW--IGTFEGHKGAVWSSCLDNNALRAASASADFSAK 86
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 366 EDAHHAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQTEDFGVK 521
+D+H + NG DW F+GH GA S+ N L + DF K
Sbjct: 39 KDSH--PMLRNGETGDW--IGTFEGHKGAVWSSCLDNNALRAASASADFSAK 86
>At1g29940.1 68414.m03658 DNA-directed RNA polymerase family protein
similar to SP|P22138 DNA-directed RNA polymerase I 135
kDa polypeptide (EC 2.7.7.6) (RNA polymerase I subunit
2) {Saccharomyces cerevisiae}; contains Pfam profiles
PF04563; RNA polymerase beta subunit, PF04560: RNA
polymerase Rpb2 domain 7, PF04561: RNA polymerase Rpb2
domain 2, PF04565: RNA polymerase Rpb2 domain 3,
PF00562: RNA polymerase Rpb2 domain 6
Length = 1114
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 101 RQARVLPNPNTFMQLVCFFYNEG*LLRD 18
RQA++ TFM VCF YN+G ++RD
Sbjct: 41 RQAKI-SYTGTFMADVCFKYNDGVVVRD 67
>At1g18030.1 68414.m02230 protein phosphatase 2C, putative / PP2C,
putative contains similarity to protein phosphatase 2C
GI:3777604 from [Rattus norvegicus]
Length = 351
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +3
Query: 333 VASMQGWRVEMEDAH----HAQLTLNGTLSDWSYFAVFDGHAGARVSAHCAENLL 485
VA +G R MED A L GTL ++FA++DGH G R++A A+ L
Sbjct: 77 VAEDKGARHTMEDVWVVLPDASLDFPGTLR-CAHFAIYDGH-GGRLAAEFAKKHL 129
>At3g50990.1 68416.m05583 peroxidase, putative similar to peroxidase
ATP6a [Arabidopsis thaliana] gi|1429215|emb|CAA67310
Length = 336
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 124 NYFYVTLIGKQGFFQTQTLLCSLSVSFIMKVNYYA 20
NY+Y L+ +G + +L + S+ + V YYA
Sbjct: 261 NYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYA 295
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 396 NGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQTEDFGVK 521
NG DW F+GH GA S+ N L + DF K
Sbjct: 47 NGETGDW--IGTFEGHKGAVWSSCLDNNALRAASASADFSAK 86
>At1g48040.1 68414.m05354 protein phosphatase 2C-related /
PP2C-related similar to protein phosphatase-2C
GB:AAC36698 GI:3643085 from [Mesembryanthemum
crystallinum]
Length = 377
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Frame = +3
Query: 354 RVEMEDAHHAQLTLNGTLSDWSY------FAVFDGHAGARVSAHCAENLLECILQTEDF 512
R MED H L+ L +++ + VFDGH G + ENL Q F
Sbjct: 82 RETMEDEHICIDDLSAHLGSYNFSVPSAFYGVFDGHGGPEAAIFMKENLTRLFFQDAVF 140
>At5g02760.1 68418.m00218 protein phosphatase 2C family protein /
PP2C family protein similar to Ser/Thr protein
phosphatase 2C (PP2C6) (GI:15020818) [Arabidopsis
thaliana]; similar to protein phosphatase 2C
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 370
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 387 LTLNGTLSDWSYFAVFDGHAGARVSAHCAENL 482
LT N ++ V+DGH G S A+N+
Sbjct: 61 LTFNNPTVQGTFVGVYDGHGGPEASRFIADNI 92
>At3g17250.1 68416.m02205 protein phosphatase 2C-related /
PP2C-related similar to protein phosphatase-2C
GB:AAC36698 from [Mesembryanthemum crystallinum]
Length = 422
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 417 SYFAVFDGHAGARVSAHCAENLLECILQTEDF 512
+++ VFDGH G+ S + EN + + F
Sbjct: 157 AFYGVFDGHGGSDASQYIKENAMSLFFEDAVF 188
>At2g20050.1 68415.m02343 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain;
Length = 514
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 399 GTLSDWSYFAVFDGHA--GARVSAHCAENLLECILQTEDFGV 518
G+ SD +F VFDGH GA+ S L E +L+ F V
Sbjct: 136 GSNSDDHFFGVFDGHGEFGAQCSQFVKRRLCENLLRHGRFRV 177
>At3g48675.1 68416.m05315 hypothetical protein
Length = 119
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 535 CFSYVFTPKSSVCRIHSRRFSAQCAETRAPACPSNTA 425
C+S +F + V I+ FS Q A AP C + +A
Sbjct: 47 CWSSLFNVQGCVQEIYKSIFSGQFASIEAPCCKTFSA 83
>At3g15260.2 68416.m01928 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase type 2C
GB:AAD17805 from [Lotus japonicus]
Length = 289
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 423 FAVFDGHAGARVSAHCAENLLECILQTEDF 512
FA+FDGH + + +L E IL+ +F
Sbjct: 74 FAIFDGHLSHEIPDYLCSHLFENILKEPNF 103
>At3g15260.1 68416.m01927 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase type 2C
GB:AAD17805 from [Lotus japonicus]
Length = 289
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 423 FAVFDGHAGARVSAHCAENLLECILQTEDF 512
FA+FDGH + + +L E IL+ +F
Sbjct: 74 FAIFDGHLSHEIPDYLCSHLFENILKEPNF 103
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 396 NGTLSDWSYFAVFDGHAGARVSAHCAENLLECILQTEDFGVK 521
NG DW F+GH GA S +N + + DF K
Sbjct: 42 NGETGDW--IGTFEGHKGAVWSCSLDKNAIRAASASADFTAK 81
>At1g55700.1 68414.m06378 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 679
Score = 27.1 bits (57), Expect = 10.0
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 312 GNGLRYGVASMQGWRVEMEDAHHAQLT---LNGTLSDWSYFAVFDGHAGARVSAHCAENL 482
G G Y + S +G R ++ DA A L ++G+ S +F + G S+HC+
Sbjct: 478 GFGFMY-ICSEKGCRFQL-DARCASLPDPFIHGSHSHELFFNLTKGECMGCESSHCSPYS 535
Query: 483 LECILQTEDFGVK 521
LEC+ G+K
Sbjct: 536 LECMECKSFLGLK 548
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,573,700
Number of Sequences: 28952
Number of extensions: 205304
Number of successful extensions: 572
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -