Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060327.seq
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro...    36   0.069
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P...    36   0.069
AE014134-2525|AAS64710.1|  299|Drosophila melanogaster CG18420-P...    30   3.4  

>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p protein.
          Length = 1654

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +1

Query: 130  LPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 246
            +P  Q  AQL TTVP+P  + Q+P  P  N  AVQ  +Q
Sbjct: 1497 VPRRQKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534


>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
            protein.
          Length = 1654

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +1

Query: 130  LPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 246
            +P  Q  AQL TTVP+P  + Q+P  P  N  AVQ  +Q
Sbjct: 1497 VPRRQKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534


>AE014134-2525|AAS64710.1|  299|Drosophila melanogaster CG18420-PA
           protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 295 GFTFLSSVLVSTAELCFVS*AELLLRFLQVYLELEGYHEE 176
           G T +S  LV TA  CF+    +++R  +   +L+GY EE
Sbjct: 70  GGTLISRRLVLTAAHCFIPNTTIVVRLGEYNRKLKGYREE 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,826,265
Number of Sequences: 53049
Number of extensions: 412160
Number of successful extensions: 1285
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)