Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060325.seq
(690 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 107 2e-24
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 75 7e-15
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 73 4e-14
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 69 8e-13
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 68 1e-12
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 62 7e-11
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 57 2e-09
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 53 4e-08
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 36 0.006
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 34 0.017
SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3 sub... 29 0.84
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 4.5
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 5.9
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.8
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 25 7.8
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 25 7.8
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 107 bits (256), Expect = 2e-24
Identities = 51/86 (59%), Positives = 66/86 (76%)
Frame = +3
Query: 252 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 431
PAAKTLVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++IR R A++LA+
Sbjct: 78 PAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAV 137
Query: 432 EKIKEQAVKIDNKSPEEQRDLLLKCA 509
KIKE A+ +D + RDLL KCA
Sbjct: 138 NKIKEIAIHLDLSDEGKLRDLLTKCA 163
Score = 106 bits (255), Expect = 3e-24
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = +1
Query: 40 QPQILLLXEGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 219
Q +++L EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 220 ATIMKLLDIVHPPLRLL 270
ATIMKLLDIVHP + L
Sbjct: 67 ATIMKLLDIVHPAAKTL 83
Score = 80.6 bits (190), Expect = 2e-16
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 479 GTKRSPIEVC-STAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALED 655
G R + C STAM+SKLI F+K+VVDAVL+LD L +MIGIKKVPGGA+ED
Sbjct: 153 GKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENMIGIKKVPGGAMED 212
Query: 656 SFLVPGVAFKK 688
S LV GVAFKK
Sbjct: 213 SLLVKGVAFKK 223
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 75.4 bits (177), Expect = 7e-15
Identities = 36/85 (42%), Positives = 55/85 (64%)
Frame = +3
Query: 252 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 431
PAAK+++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A A+
Sbjct: 73 PAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDAL 132
Query: 432 EKIKEQAVKIDNKSPEEQRDLLLKC 506
I E + ++ E L+ C
Sbjct: 133 SIIDEITLPVNVDDNAEMFRLIRTC 157
Score = 59.7 bits (138), Expect = 4e-10
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +1
Query: 37 MQPQILLLXEGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 216
MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND
Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60
Query: 217 GATIMKLLDIVHP 255
G I++ +++ HP
Sbjct: 61 GHAILREIEVAHP 73
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 72.9 bits (171), Expect = 4e-14
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +1
Query: 76 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 249
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 250 HPPLRLLWTLQS 285
HP ++L L +
Sbjct: 72 HPAAKMLVDLSA 83
Score = 71.3 bits (167), Expect = 1e-13
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +3
Query: 252 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 431
PAAK LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+ +
Sbjct: 73 PAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTV 132
Query: 432 EKIKEQAVKID 464
+ +KE A+ I+
Sbjct: 133 DCMKENALAIE 143
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 68.5 bits (160), Expect = 8e-13
Identities = 35/73 (47%), Positives = 50/73 (68%)
Frame = +3
Query: 255 AAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIE 434
AAK LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R A++ AI+
Sbjct: 76 AAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAID 135
Query: 435 KIKEQAVKIDNKS 473
++ A IDN S
Sbjct: 136 ALR--ASSIDNSS 146
Score = 53.6 bits (123), Expect = 3e-08
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +2
Query: 488 RSPIE-VCSTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFL 664
RS +E + T +SSK++ Q K+HF+++ VDAVL L LD I I K+ GG L+DSFL
Sbjct: 152 RSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGS-TNLDNIQIIKILGGKLDDSFL 210
Query: 665 VPGVAFKK 688
G K
Sbjct: 211 DEGFILNK 218
Score = 49.2 bits (112), Expect = 6e-07
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 55 LLXEGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDH-NGKAVISNDGATIM 231
+ E Q +G+ +S+ V D V++TLGP+GMDK++ + +G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 232 KLLDIVHPPLRLLWTLQSLK 291
K + + + ++L + ++
Sbjct: 68 KSIALDNAAAKVLVNISKVQ 87
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 67.7 bits (158), Expect = 1e-12
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 252 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 431
PA K LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 432 E 434
+
Sbjct: 135 K 135
Score = 59.3 bits (137), Expect = 5e-10
Identities = 25/66 (37%), Positives = 43/66 (65%)
Frame = +1
Query: 73 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVH 252
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 253 PPLRLL 270
P ++L
Sbjct: 75 PAGKVL 80
Score = 43.6 bits (98), Expect = 3e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +2
Query: 485 KRSPIEVCSTAMSSKLIHQQKDHFSKIVVDAVLSLDT------PLLPLDMIGIKKVPGGA 646
K S I V T+MSSK+I D FS + VDA+LS+ T P+ + I K G +
Sbjct: 150 KESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKS 209
Query: 647 LEDSFLVPGVA 679
+S LV G A
Sbjct: 210 SRESVLVKGYA 220
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 62.1 bits (144), Expect = 7e-11
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +3
Query: 258 AKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEK 437
AK LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A ++A++
Sbjct: 90 AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKH 149
Query: 438 IKEQAVKIDNKSPEEQRDL 494
+ + +D SPE +L
Sbjct: 150 LDAISDVVD-FSPENTTNL 167
Score = 57.6 bits (133), Expect = 2e-09
Identities = 24/56 (42%), Positives = 41/56 (73%)
Frame = +1
Query: 103 SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVHPPLRLL 270
S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +++ H +LL
Sbjct: 38 SHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLL 93
Score = 42.3 bits (95), Expect = 6e-05
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +2
Query: 512 TAMSSKLIHQQKDHFSKIVVDAVLS---LDTPLLPLDMIGIKKVPGGALEDSFLVPGVAF 682
T++ SK++ + DHF+ I VDAVLS L + ++I + GG+++D+ LV GV
Sbjct: 173 TSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGVVV 232
Query: 683 KK 688
K
Sbjct: 233 DK 234
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 57.2 bits (132), Expect = 2e-09
Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 55 LLXEGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 231
L EG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 232 KLLDIVHPPLRLL 270
+ L+++HP +L+
Sbjct: 73 RELEVIHPAAKLV 85
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 431
PAAK +VD + Q+ E+GD VV+ GE+L + + + G+ P + + A +
Sbjct: 80 PAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTM 139
Query: 432 EKIKE-QAVKIDNKSPEEQ 485
E ++E A KI+ E++
Sbjct: 140 EVLEEICADKIETVESEKE 158
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 52.8 bits (121), Expect = 4e-08
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +3
Query: 246 RSPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRL 425
++P A + A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++ A
Sbjct: 68 QNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNE 127
Query: 426 AI 431
A+
Sbjct: 128 AL 129
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +1
Query: 55 LLXEGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 234
LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 235 LLDIVHP 255
+ I +P
Sbjct: 64 EMQIQNP 70
Score = 34.3 bits (75), Expect = 0.017
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 497 IEVCSTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLPLD--MIGIKKVPGGALEDSFLVP 670
+ V T++S+K+ + + + VVDA+L++ P P+D M+ I K+ + D+ L+
Sbjct: 147 LNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDEPIDLHMVEIMKMQNRSASDTQLIR 206
Query: 671 GV 676
G+
Sbjct: 207 GL 208
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 35.9 bits (79), Expect = 0.006
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 617 IGIKKVPGGALEDSFLVPGVAFKK 688
+ IKK+PGG+++D FLV GV F K
Sbjct: 525 VKIKKIPGGSIQDCFLVNGVLFSK 548
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 34.3 bits (75), Expect = 0.017
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = +3
Query: 243 YRSPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASR 422
+ + A+ + D+A + GDGTT+ +L I V G +P L R ++ A
Sbjct: 97 FENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVD 156
Query: 423 LAIEKIKEQAVKIDNKSPEE 482
+E + QA K D + EE
Sbjct: 157 NVVEFL--QANKRDITTSEE 174
Score = 30.3 bits (65), Expect = 0.27
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 136 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 246
AV TLGP+G + LI G I+ DG T+ + + +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSL 93
>SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 804
Score = 28.7 bits (61), Expect = 0.84
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 127 VVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL-DIVHPPLRLLWTLQSLK 291
+VD +R G KL++ N + S D + + LL D V PLR+ ++ QS K
Sbjct: 168 IVDFIRACTVSYGKVKLVLKKNRYFIESGDASVLRLLLRDPVIGPLRIDYSTQSSK 223
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 369 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 503
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 354 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 503
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 631 LLDSNHVERQKWSVQRQDSINNNLREVI 548
L DSNHV+ QK +DS N L +++
Sbjct: 56 LFDSNHVDGQKGDSVLRDSANAPLTDLM 83
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/45 (22%), Positives = 20/45 (44%)
Frame = -3
Query: 685 LESHTRYQERIFKSSTGNLLDSNHVERQKWSVQRQDSINNNLREV 551
++ T Y+E + K H+E W+++ I N + E+
Sbjct: 383 VQRKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINEL 427
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.4 bits (53), Expect = 7.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 165 DGQADCRSQWKGGYI 209
DG+ +C S+WK Y+
Sbjct: 555 DGKVECNSKWKSWYV 569
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,855,096
Number of Sequences: 5004
Number of extensions: 56985
Number of successful extensions: 193
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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