Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060323.seq
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        26   0.98 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.2  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   6.9  

>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 572 SCC*GWCCQEKCFRCTSTWLI 634
           SC   WCC+ KC  C +  +I
Sbjct: 75  SCTFHWCCEVKCKLCRAKKII 95


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
 Frame = +1

Query: 172 DTRNLFAVSXXVY*FSIKNGNKINQGSSIFDSRGNPTVEVDLVTELGLFRAAVPSGASTG 351
           D R     S  V  F +KN +     S +  ++ N T+       L L +  +PS     
Sbjct: 78  DRREFNKRSHEVRAFLLKNSSHSGASSGLNTTQVNTTISAGTQNHLRLPKVDLPS-FDGE 136

Query: 352 VHEALELRDNIKSEYHGKGVLTAIKNINELI-APELTKANLEVTQQREIDELMLSWMAL 525
           + + L  +D   S  H    +  +  +  L+ A +   A+     Q   D   ++W AL
Sbjct: 137 ITKWLTFKDRFSSMVHDSTEMPEVLKLQYLLSALKGDAAHQFEHMQITADNYYVTWEAL 195


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 364 ELHEHQWRHQRVQLPGTNQALLPDQLPL 281
           +L EH+ RH ++ +     AL P QL L
Sbjct: 440 DLMEHRIRHTQIGISRALSALAPIQLDL 467


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,305
Number of Sequences: 2352
Number of extensions: 11032
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)