Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060322.seq
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 50 3e-07
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 32 0.090
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 29 0.48
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 29 0.84
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 28 1.1
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 28 1.1
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 28 1.5
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 27 1.9
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 27 3.4
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 27 3.4
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 4.5
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 4.5
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 26 4.5
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 25 7.9
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 25 7.9
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 50.0 bits (114), Expect = 3e-07
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +3
Query: 354 IVSGWVLLGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIXKSYRKQSL 506
++ GW+ +GFL+YK++ +++ +DPYEILG+ G + ++ + Y++ S+
Sbjct: 73 LILGWLAIGFLSYKIANSRLKLNIWDPYEILGIAKGTSVDDVRRHYKRLSI 123
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 31.9 bits (69), Expect = 0.090
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSLV 509
D Y+ILG+ AT EI K+YRK +LV
Sbjct: 349 DHYKILGVSKEATDIEIKKAYRKLALV 375
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 29.5 bits (63), Expect = 0.48
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 405 FDYEMSNFDPYEILGLPPGATQAEIXKSYRKQSL 506
+ + + DPY +LG+ A+ I ++YRK++L
Sbjct: 23 YSFIKMDIDPYSVLGVEKDASDELIRRAYRKKAL 56
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 28.7 bits (61), Expect = 0.84
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
YE+L + A+QAE+ K+YRK +L
Sbjct: 8 YEVLNVDVTASQAELKKAYRKLAL 31
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 414 EMSNFDPYEILGLPPGATQAEIXKSYRKQSL 506
E + D YE+LG+ A EI +++RK SL
Sbjct: 4 EGDSIDYYELLGINEDAQDQEIHRAWRKTSL 34
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 423 NFDPYEILGLPPGATQAEIXKSYRKQSL 506
N YEIL L T EI KSY+K +L
Sbjct: 111 NHQYYEILDLKKTCTDTEIKKSYKKLAL 138
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 420 SNFDPYEILGLPPGATQAEIXKSYRK 497
+NF +ILG+ A+++EI K+YR+
Sbjct: 4 NNFSQKQILGVSKDASESEIRKAYRQ 29
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSLV 509
YE+L +P A+ EI ++YRK+S++
Sbjct: 42 YELLEVPTKASIKEINRAYRKKSIL 66
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRK 497
Y++LG+ AT +I K+YRK
Sbjct: 10 YDLLGISTDATAVDIKKAYRK 30
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 402 QFDYEMSNF--DPYEILGLPPGATQAEIXKSYRKQSLV 509
+ D +S+F + Y++L + PG + +I YRK+SL+
Sbjct: 20 EIDRILSSFKLNAYDVLDILPGMSVDDIRNLYRKKSLM 57
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.2 bits (55), Expect = 4.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 151 GSTFFYFVLSFLALILVP 204
G+ FF +++FLALI++P
Sbjct: 1836 GTMFFLLLIAFLALIIIP 1853
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 237 RRSCKIAERCQCPNCVSKQLIIEQSQPYKSVKN 335
RR K +R C NC++ QP+K +++
Sbjct: 21 RRKIKCDQRRPCSNCIAYNYECTYGQPFKRLRH 53
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 414 EMSNFDPYEILGLPPGATQAEIXKSY 491
E+ + PYEIL LP T +I + Y
Sbjct: 27 ELKSLTPYEILELPRTCTANDIKRKY 52
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 260 KMSVSKLC*QTTNHRTIAALQKREKFLCETCYSI 361
K S + C T+ RT+A+L + E E C S+
Sbjct: 974 KESAAFACESTSAIRTVASLNREENVFAEYCDSL 1007
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 414 EMSNFDPYEILGLPPGATQAEIXKSYRKQS 503
E +++ Y LGLP AT +I +SY + S
Sbjct: 3 EADSWELYLALGLPKDATSDQIKESYYRLS 32
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,850,508
Number of Sequences: 5004
Number of extensions: 57551
Number of successful extensions: 153
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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